(CDKN1A) cyclin-dependent kinase inhibitor 1A (p21, Cip1) [Homo sapiens] |
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Gene
Transcript(s)
Exon(s)
Protein(s)
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Accession
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4058
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Official symbol
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CDKN1A
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Official name
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cyclin-dependent kinase inhibitor 1A (p21, Cip1)
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Gene type
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gene with protein product
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Organism
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Homo sapiens
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Location
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Chromosome 6 (NC_000006.11) : 36646458...36655108 (+)
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Map
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6p21.1
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Length
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8651 nt
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NM_000389.3
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CDKN1A, mRNA isoform 1
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NM_078467.1
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CDKN1A, mRNA isoform 2
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Accession
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Name
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Organism
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Length
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P38936
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Cyclin-dependent kinase inhibitor 1
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Homo sapiens
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164 aa
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Q6FI05
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CDKN1A protein [submitted name]
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Homo sapiens
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164 aa
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Synonyms |
MDA-6; WAF1; SDI1; p21Cip1/Waf1; p21CIP1; P21; CIP1; CDKN1; CAP20
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Alternative name(s) |
p21Cip1/Waf1; DNA synthesis inhibitor; wild-type p53-activated fragment 1; CDK-interaction protein 1; melanoma differentiation associated protein 6
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Summary |
This gene encodes a potent cyclin-dependent kinase inhibitor. The encoded protein binds to and inhibits the activity of cyclin-CDK2 or -CDK4 complexes, and thus functions as a regulator of cell cycle progression at G1. The expression of this gene is tightly controlled by the tumor suppressor protein p53, through which this protein mediates the p53-dependent cell cycle G1 phase arrest in response to a variety of stress stimuli. This protein can interact with proliferating cell nuclear antigen (PCNA), a DNA polymerase accessory factor, and plays a regulatory role in S phase DNA replication and DNA damage repair. This protein was reported to be specifically cleaved by CASP3-like caspases, which thus leads to a dramatic activation of CDK2, and may be instrumental in the execution of apoptosis following caspase activation. Two alternatively spliced variants, which encode an identical protein, have been reported. [provided by RefSeq].
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Related Articles in PubMed
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Go to ensembl
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1 |
TGTATATCAG |
GGCCGCGCTG |
AGCTGCGCCA |
GCTGAGGTGT |
GAGCAGCTGC |
CGAAGTCAGT |
TCCTTGTGGA |
GCCGGAGCTG |
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81 |
GGCGCGGATT |
CGCCGAGGCA |
CCGAGGCACT |
CAGAGGAGGT |
GAGAGAGCGG |
CGGCAGACAA |
CAGGGGACCC |
CGGGCCGGCG |
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161 |
GCCCAGAGCC |
GAGCCAAGCG |
TGCCCGCGTG |
TGTCCCTGCG |
TGTCCGCGAG |
GATGCGTGTT |
CGCGGGTGTG |
TGCTGCGTTC |
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241 |
ACAGGTGTTT |
CTGCGGCAGG |
TGAATGACGG |
GCGTGGGTCG |
GTGCGCGCTC |
GGCTTGCGCA |
CACGGTGTCT |
CTAAGTGCGC |
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321 |
GGGTGACGAG |
AGTCGGGATG |
TGCCGGAGAC |
CCCGGGGCGG |
AGAGCGGGAT |
TACAAGTACA |
GGAATCCCTG |
GTCACGCTCC |
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401 |
CCGCCCCTGG |
AAACCCAGCT |
GGGGCGAGGG |
AGGGCGTGGA |
CGGGACCGTT |
CTGGGAGCTC |
GCCTTTGGCT |
GCGGTTGGCT |
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481 |
CCAGGCCCCA |
GGCGCAGTTT |
GCTCGCGGCG |
TGGGGATGAA |
GTCCGTGTCC |
CTGGAGGGGC |
CCAGGAAGGG |
CGAGGAAAGC |
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561 |
GGAGTGGAGT |
AAGTTCGTCT |
AGGATCGGTC |
CCGGGTGGCT |
CTGGGATCCA |
ATCTGCGCCG |
CCCTGGCCCA |
GGTCCCAGGT |
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641 |
TCAGGTCCTT |
TACGCCACTG |
TGTCCACCAC |
CTGGCTGAGC |
GCTGAGGTCA |
GCGCGGGCTG |
TTTCCTGGCC |
CTTGGGAATG |
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721 |
TGCCAGGACC |
CGTCCCCTAA |
GGACTAGCGA |
GGAGGTGACT |
CACTGTGACA |
AGGAGACCCC |
AGGGAACGGA |
CTGTATGAGG |
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801 |
TCAGAACCCC |
GCCCGGGATG |
GGGTACAGCG |
GGACTCCAGA |
AGCCCTCTCC |
CCTGCCCCTT |
CGCGGTCTCC |
GTCCTCCCAT |
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881 |
CGGCACAGTG |
ACCTATTTGG |
CTGGAACAGT |
TTGTTCCCAA |
GGAAGCCGGG |
CACTGGAGGT |
CCGGGACACC |
GCGTCGGGTC |
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961 |
CCCGCTCCGC |
GGCGCGCTGT |
AGGGGTCGGG |
GAGTCACGGC |
CCTGCTCTGG |
GCGGGCTCTA |
ACCAGCCTGT |
CAGTCGGGGA |
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1041 |
AGGGCAAGGG |
TCTCCTCTAC |
CTCTTTCCCA |
CCGCGGCCGG |
GAGAATCGCG |
GCCCAGCCTG |
TCCTCGGGTC |
GGGGCGCTGG |
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1121 |
ACTCCGGGGC |
GGGAGCGGAG |
CCCACGCCTG |
GATGGGAGGC |
GGGGAGGGTT |
CATGTCTTTG |
AGGGGTGGGG |
GGTCTGGGGG |
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1201 |
GCACGACGCT |
GCTCAGGGCC |
TCTATCAGCT |
GCCTCGGGGG |
CTCAGGGCTT |
CCCGACCTAG |
CCCAGATTCC |
CTCTCCGAAA |
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1281 |
GCTACAGGGC |
TGAGCGGAGC |
AGGGGGGCGA |
GTCGCCCCCT |
GGGGCGCCGC |
CGCCTGGCGC |
GGACCACAGC |
GCGTCCTCTC |
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1361 |
CGTCCCAAAC |
CCCTGGGGGA |
CACTTGCGCC |
CTCTTCGTGA |
GGAAAAGCAT |
CTTGGAGCTG |
GGTTAGGAAC |
TTGGGGCGCC |
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1441 |
CAGGCAGCTT |
CCCCTCTCCT |
TGCCTCCCTC |
CACGTCGCGT |
TTCTGGGAGG |
ACTTGCGAGC |
GGTTTTGTTT |
TCGTTGCTCC |
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1521 |
CGTCTATTTT |
TATTTTCCAG |
GGATCTGACT |
CATCCCGTGC |
TTTGGGCGTG |
GAGATAAGGT |
GGAGGGGCCG |
GCTCCCGGCG |
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1601 |
CGCGCGCGCG |
TGCGTGTCTG |
CGCGGGCGTG |
TGTGTGTGTG |
TGTGTGTGTG |
TGTGTGTGTG |
TGTGTCTGTG |
TCAGAGACGG |
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1681 |
CACAAGAGCG |
CGCGGTTTCC |
CAACAGCGGC |
GGGAGTTTCG |
GAAGCCTGGC |
CGGCTCAGCG |
TGACGTGTTC |
GCGGCCCCCC |
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1761 |
GGTCCCCTCC |
CATTCTCCCC |
CTCCCCACCC |
CAGGGTGACG |
CGCAGCCGGA |
GTGGAAGCAG |
TTTTGGCGGG |
CGAGCAGCGC |
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1841 |
CTTGCAGGAA |
ACTGACTCAT |
CACTACTCCC |
TCCAGCGGTC |
CGAGGCTCTG |
CCCACGCACC |
TCCCACTCCG |
CGCGTGATTT |
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1921 |
CCTGGAGGCC |
GGCGCCCCCT |
CCCGGCCCTG |
GCGGGAATAG |
CACACAGGCT |
TTCCCGCGGA |
GTGGGGCTGG |
CCGGCGCGAA |
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2001 |
CCGCCGCGGC |
TACTCCTGGG |
CTCATCCGAG |
ATCAACCCCT |
ATGCCATTAC |
CACCCCTTCA |
AAGGAGCACT |
CCTTAGGTTC |
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2081 |
AACAGTATTC |
ACTGAGCTCT |
TACTGGAAAT |
TAAAATATGG |
CTGAAGTCTA |
AGGCAGGAAG |
GCCAATAAAG |
GAGGCTATTT |
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2161 |
TTAATTGTTT |
CTAAAACAAG |
GGTTTGCGTT |
TCTGAGTTTT |
CTTTGGGCTG |
AAAGTTATTA |
TGAGCATGAG |
AGCAGATTTT |
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2241 |
GATGGGGGAG |
GAGAGGCCTA |
TGAGAGCCAT |
AAGAGAAGGA |
GGGGTGGTAG |
AAGAGGAGAG |
GGTGCCTGCC |
TAGATCCTAG |
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2321 |
TCCTGTCTTG |
AACTCCCGAG |
AGCCAGGGAA |
TATCCAGCAC |
CTTGATGAAG |
CCCTAGGCGG |
GCGCCTCCTC |
CTTGTGCCTA |
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2401 |
TGATGTATTG |
AGACCCAGAA |
TGTCCATTTC |
AAACATACCA |
GTGTGTCTCC |
GCTTGGCTGG |
CAACCCAAGA |
GTGCCCATCT |
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2481 |
GAGGAATTGT |
GCCAAACACT |
TGCTTGAATC |
TTCAATCTGG |
ATTAAGTTGG |
TCTCGGGAGG |
CAGGGCCTCA |
GCAATCTATA |
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2561 |
TTTTGAAAAA |
ACTCCCTAGG |
TGCTTTTCTT |
TCTTTCTTTT |
TTTCTTTCTT |
TCTTTCTTTC |
TTTCTTTCTT |
TCTTTCTTTC |
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2641 |
TTTCTTTCTT |
TCTTTTTCTT |
TCTTTCTTTC |
TTTTTCTTTC |
TTTTCTTTCT |
TTCTTTCTTT |
CTTTCTTTCT |
TTCTTTCTTT |
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2721 |
CTTTCTTCCT |
TTCTCTTTCT |
CTCTTTCTTT |
CTCTTTCTCT |
CTTTCTTTCT |
TTTCTTTCGA |
CAGAGTTGCA |
CTCTGTCACC |
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2801 |
CAGGCTGGAG |
TGCAATGGCA |
CCATCCTGGA |
CTCAAGTAGT |
CCTCCTGTTT |
CAGCCTCCCA |
AGTAACCGGG |
ACCACAGGCG |
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2881 |
TGATCCCCCC |
GCCCCCATGC |
CCAGATTTTT |
TTTTTTTTTT |
TTTTTTTTTT |
GAGATGCGGT |
CTCGCTCTGT |
CACCCAGGCT |
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2961 |
GGAGTGCAGT |
GGCGTGATCT |
CGGCTCACTG |
CAAGCTCCGC |
CTCCCGGGTT |
CACGCCATTC |
TCCTGCCTCA |
GCCTCCCGAG |
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3041 |
TAGCTGGGAC |
TACAGGTGCT |
GCCATCATGC |
CCGGCTAATT |
TTTTTTTGTA |
TTTTTAGTAG |
AGACGGGGTT |
TCACCGTGTT |
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3121 |
AGCCAGGATG |
GTCTCAATCT |
CCTGACCTCG |
TGCTCCGCCC |
TCCTCGGCCT |
CCCAAAGTGC |
TGGGATTACA |
GGTGTGAGAC |
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3201 |
ACTGCACCCA |
ACCACCCAGC |
TAATTTTTAT |
TTATTTTTAT |
TTTTAGTAGA |
GACAGGGTCT |
CAGCTAGTTG |
CCCAGGCTAG |
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3281 |
TCTTGGACCC |
TTGGGCTCAA |
ATGATTCTCC |
CACCTCTGCC |
TCCCAGAGTA |
TTAGGATTAC |
AGGCATAAGC |
CACTGCCCCT |
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3361 |
GGCCTCCCCA |
AGTGATTGTG |
ATGGGCCTCT |
CTGGTTAAGA |
AACCTCAAAA |
TTAGAGAGGG |
AGTGGGGTTC |
AATACTACAG |
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3441 |
CACAGGACTC |
AGGGCAAACA |
GGCCTGGGTT |
CAGATCCTGG |
CTGTGCCACT |
TATGAACTGT |
GTGATGTTAG |
GCAAGTTACT |
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3521 |
TAACTTATCT |
GAGCCTTGGT |
TGCCTCTTCT |
GTAAAAAGGG |
AGCTAATAGA |
TATCCACTTT |
TTAGGAGGAT |
TGATATTTTT |
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3601 |
AAACTGCTTA |
GAACAGCCCC |
CAAACATAAA |
AATATATAAA |
TAAATCCCAA |
CTCATGCCTA |
GCAGAGGGTG |
GATAGAGGTT |
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3681 |
ATTTGAGGGC |
TCTGTCCACT |
GTACTGGGTG |
ACCCCTTTAT |
GGGGCAGTGG |
CCTTTGGCCT |
TTTTAGCTGT |
ATGACTCAGG |
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3761 |
GGCAAGTCTC |
ATATCTCTTC |
CATCTCCTGC |
CCTTTAAACT |
TGGTGTGAAG |
TTACCAAGAG |
CCTCCTCTCC |
CAACCAGCTG |
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3841 |
GGACGTGAAA |
CTGTGGGCTC |
CACTGATCAC |
AAGCAGTGGG |
GTGAGGTGGG |
GTGGAGCAGA |
TGTGGCATGT |
GTCCCGGGCT |
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3921 |
TCCTGCCTCA |
TGAGGACTCA |
GCAGAGCTTT |
CACCCCCAGA |
AACTGCAAGT |
TGGGACTTGT |
CCCTAGGAAA |
ATCCAGTTGC |
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4001 |
TGCCAAGGTC |
GTGCAGTCAC |
TCAGCCCTGG |
AGTCAAGCCA |
GAGCAGGCAG |
GTAGGTGCCA |
GGGCTCCCTC |
ATGGGCAAAC |
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4081 |
TCACTCTCCG |
TTTTCCCTCT |
CCTGAAGGGG |
GAGGAGAGGA |
GCCAGGTAGA |
CCAGCCACCT |
TTAATTTTCT |
TTTTGCCTGC |
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4161 |
AAAACGGTTT |
CCTTGGACAC |
AGGCAACACG |
AGGCAGGGGC |
TGCCAGGTGT |
CTAGACTTCA |
GATCACCTGA |
TGTGCCTGGC |
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4241 |
AGGATGTGGC |
TCAGCCTGGG |
AGAAATCATC |
CCTTGCGCTG |
CCCCGCCCGG |
CCCCTCCTTA |
CCCCTAGGCC |
ACCCGCCTGA |
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4321 |
CGACATCCTT |
GGGAAAGGCC |
CTCAGCCTAC |
AGCACCTGTC |
AGCTGCTGTC |
TGAAGGAGGT |
AGTTGGCAGG |
GGGAAGTGAT |
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4401 |
AGGGGGGAGG |
CTCAGTAAAA |
CTGAAGGCAG |
AGAGGAATAA |
TCATACTTCT |
GTTTTCAATG |
CACTTCTCTA |
TACGAAGTGC |
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4481 |
TGCTGGCACG |
TTACCTACAT |
TAACTCAGTT |
AATTCTCATG |
TCTATCCTCT |
GAGACAGTCA |
CTATTACTAT |
CCCCATTTTA |
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4561 |
TAGATGAGGA |
AACTAGAGCT |
CAGACAAGTT |
AAGTTGCTTG |
CCCAGGGTCA |
CCTAGTAAAA |
CCTGGACTCC |
AGCCCAGGTG |
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4641 |
ATCTGGCTCC |
AGAGCCCTCC |
TGCTTAACCA |
CCAGGATACA |
GCCTTTCATT |
CAGCTCTGTT |
CTGTCTGCCT |
TGCTGCATGG |
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4721 |
ACTCTGTGAT |
CAATTTCTTG |
AGTATGTGTC |
TGTAGCCATG |
CTCTTTAAAC |
TTGTACATGG |
CCCCATTTAT |
GGATGAGGAA |
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4801 |
ACTGAGACCT |
AGAGACATTA |
AGTGGCTTTT |
TAAAGCTTAC |
GTAGTAACTG |
GCAGAGCTAG |
GACCACAACC |
CGGGTGCTTT |
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4881 |
TTGCCCCAAA |
GTCCCGGGTA |
CTTTTACTTG |
GCAGAGCAGG |
GTTACCCTAC |
TTGGGGATCT |
GGGTCGGGGG |
ACTTAGGAGG |
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4961 |
CTGGAGGAAC |
TGTCAGACTG |
TTTCTTCTTT |
TGGGAATTGA |
CCTTCTGGCC |
AGGGCTGCGA |
TTAGGAAACT |
GCTGGACTCT |
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5041 |
GGCAATTCAC |
ACATATTTGG |
GGGGCATTCA |
CACCCATGAG |
GGACACCTCT |
GGGGGGAAAA |
CAAATTGATT |
TTAGCTGATA |
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5121 |
ATACCTGGTG |
GCAAACAGGA |
CCCTGGTCCT |
TGCTCTTGCA |
ATAGACTTGC |
CTTTGTTGAC |
ATTAGCTTGC |
CCTTCAGTTG |
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5201 |
CCTGCTCTCC |
CAGTGACCTT |
GGTGTGCCAG |
GCTGGCTGAG |
CTCTGCTGGT |
GGGGGTCAGG |
CCTCCTGTGG |
GAAGGAAGCA |
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5281 |
GGAAGACCAG |
CTGGAAGGAG |
TGAGAGAGAC |
CCTCTGGTAG |
GAAGACGTCA |
CCTGAGGTGA |
CACAGCAAAG |
CCCGGCCAGG |
|
5361 |
TAACATAGTG |
TCTAATCTCC |
GCCGTGACCA |
GGGCCTTCCT |
TGTATCTCTG |
CTGCAGGCGC |
CATGTCAGAA |
CCGGCTGGGG |
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5441 |
ATGTCCGTCA |
GAACCCATGC |
GGCAGCAAGG |
CCTGCCGCCG |
CCTCTTCGGC |
CCAGTGGACA |
GCGAGCAGCT |
GAGCCGCGAC |
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5521 |
TGTGATGCGC |
TAATGGCGGG |
CTGCATCCAG |
GAGGCCCGTG |
AGCGATGGAA |
CTTCGACTTT |
GTCACCGAGA |
CACCACTGGA |
|
5601 |
GGGTGACTTC |
GCCTGGGAGC |
GTGTGCGGGG |
CCTTGGCCTG |
CCCAAGCTCT |
ACCTTCCCAC |
GGGGCCCCGG |
CGAGGCCGGG |
|
5681 |
ATGAGTTGGG |
AGGAGGCAGG |
CGGCCTGGCA |
CCTCACCTGC |
TCTGCTGCAG |
GGGACAGCAG |
AGGAAGACCA |
TGTGGACCTG |
|
5761 |
TCACTGTCTT |
GTACCCTTGT |
GCCTCGCTCA |
GGGGAGCAGG |
CTGAAGGGTC |
CCCAGGTGGA |
CCTGGAGACT |
CTCAGGGTCG |
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5841 |
AAAACGGCGG |
CAGACCAGCA |
TGACAGGTGC |
GGACATGTGC |
ACGGAAGGAC |
TTTGTAAGGG |
ACCAGGATTC |
TCAGAATCCA |
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5921 |
TGGTCCAAGG |
GCTGACCTGT |
CTGGTCCTGG |
TCCAGCATGC |
TCCAGGTAGA |
AGGAAACAGG |
CCCAGAGAGG |
GGAAGCAACC |
|
6001 |
TCCCTGAGGT |
CACACAGCAA |
GTAGGCAGCA |
AAGACCAACT |
AGCTAACATT |
TATTGGGAAT |
GTTCATTATG |
CCAGGCCCTT |
|
6081 |
TGCCAAGCTT |
CTAAGGTAGA |
TTTATTTAGT |
CCTTATAGCA |
ATGTTATAAC |
ATAAGACATT |
CTTGTCACCC |
TGCCCGCCTT |
|
6161 |
TCTTTTTGAG |
ACAGGTGTCT |
TAACTCTGTT |
GGCCAGACTG |
GAGTGCAGTG |
ATACGATCAT |
GGCTCACTGC |
AGCTTCAAAC |
|
6241 |
TCCTGGGCTC |
AAGCGATCTT |
CCTACCTCAG |
CCTCCTGGGT |
AGCTGGGAAG |
CTGGGACTAT |
AGTTGTACAC |
CACTACGCCC |
|
6321 |
GGTTAATTTT |
TTGAGTTTTT |
GTAGAGACAA |
GGTCTCACCA |
TGTTGCCCGG |
GCTGGTCTTG |
AACTCCTGAG |
CTCAAGCAGT |
|
6401 |
CCTCCTGCCT |
CAGCCTCCCA |
AAGTGTTGTG |
ATTACAGGCG |
TGAGCCACCA |
TGCCCAGCCC |
CTTGCCATCC |
TTTTAGGGCA |
|
6481 |
AGGAAACCAG |
GCTCAGAGAG |
GTAGAGTGAT |
TTATCTAAGG |
TCTCAAAGTG |
AATTTGCCGT |
TGGGTCAAGA |
CTAATTATAA |
|
6561 |
TAACAACAAC |
TACTGACGTT |
TATATGGGCC |
CGGCATTGTG |
CTGAACACTT |
TCATGGATTT |
TGTAACAGAA |
TCCCTAGATC |
|
6641 |
AGCACTGTCC |
AGTAACTCTG |
CAGGGATGGG |
AGTGTCCGGT |
ACAGGGGCCA |
CGAGCCACAT |
ACGGCTGTTG |
TGCATTTGAC |
|
6721 |
ACACAGCTCA |
TGTGACTGAG |
GAACTGAATT |
GTTCATTTTA |
TTTGATTGTA |
GTCTGTTTAA |
ACAAGCACAC |
AGAGCTAGTA |
|
6801 |
GTGGTTCCTC |
TGCTGGGCAG |
CTTGACTTAG |
AGCAGACCCA |
TGGGTGCGGG |
TGCGGTGATG |
GATAAAATCA |
CATCTGTGAA |
|
6881 |
GCATGGTGGG |
ACACTCCATA |
ATACCCCTCA |
AGAGACAGAG |
TGGACGTTCC |
CCGAGTTCTT |
CCTGTTCTCA |
GCAGTCGGCC |
|
6961 |
CCATTGGCCC |
CAGGGAAGGG |
TGTCCTGGCC |
CCCCACTGTC |
TTCCTCAGTT |
GGGCAGCTCC |
GCCGCGTCCT |
CTTCTTCTTG |
|
7041 |
GCCTGGCTGA |
CTTCTGCTGT |
CTCTCCTCAG |
ATTTCTACCA |
CTCCAAACGC |
CGGCTGATCT |
TCTCCAAGAG |
GAAGCCCTAA |
|
7121 |
TCCGCCCACA |
GGAAGCCTGC |
AGTCCTGGAA |
GCGCGAGGGC |
CTCAAAGGCC |
CGCTCTACAT |
CTTCTGCCTT |
AGTCTCAGTT |
|
7201 |
TGTGTGTCTT |
AATTATTATT |
TGTGTTTTAA |
TTTAAACACC |
TCCTCATGTA |
CATACCCTGG |
CCGCCCCCTG |
CCCCCCAGCC |
|
7281 |
TCTGGCATTA |
GAATTATTTA |
AACAAAAACT |
AGGCGGTTGA |
ATGAGAGGTT |
CCTAAGAGTG |
CTGGGCATTT |
TTATTTTATG |
|
7361 |
AAATACTATT |
TAAAGCCTCC |
TCATCCCGTG |
TTCTCCTTTT |
CCTCTCTCCC |
GGAGGTTGGG |
TGGGCCGGCT |
TCATGCCAGC |
|
7441 |
TACTTCCTCC |
TCCCCACTTG |
TCCGCTGGGT |
GGTACCCTCT |
GGAGGGGTGT |
GGCTCCTTCC |
CATCGCTGTC |
ACAGGCGGTT |
|
7521 |
ATGAAATTCA |
CCCCCTTTCC |
TGGACACTCA |
GACCTGAATT |
CTTTTTCATT |
TGAGAAGTAA |
ACAGATGGCA |
CTTTGAAGGG |
|
7601 |
GCCTCACCGA |
GTGGGGGCAT |
CATCAAAAAC |
TTTGGAGTCC |
CCTCACCTCC |
TCTAAGGTTG |
GGCAGGGTGA |
CCCTGAAGTG |
|
7681 |
AGCACAGCCT |
AGGGCTGAGC |
TGGGGACCTG |
GTACCCTCCT |
GGCTCTTGAT |
ACCCCCCTCT |
GTCTTGTGAA |
GGCAGGGGGA |
|
7761 |
AGGTGGGGTC |
CTGGAGCAGA |
CCACCCCGCC |
TGCCCTCATG |
GCCCCTCTGA |
CCTGCACTGG |
GGAGCCCGTC |
TCAGTGTTGA |
|
7841 |
GCCTTTTCCC |
TCTTTGGCTC |
CCCTGTACCT |
TTTGAGGAGC |
CCCAGCTACC |
CTTTTTCTCC |
AGCTGGGCTC |
TGCAATTCCC |
|
7921 |
CTCTGCTGCT |
GTCCCTCCCC |
CTTGTCCTTT |
CCCTTCAGTA |
CCCTCTCAGC |
TCCAGGTGGC |
TCTGAGGTGC |
CTGTCCCACC |
|
8001 |
CCCACCCCCA |
GCTCAATGGA |
CTGGAAGGGG |
AAGGGACACA |
CAAGAAGAAG |
GGCACCCTAG |
TTCTACCTCA |
GGCAGCTCAA |
|
8081 |
GCAGCGACCG |
CCCCCTCCTC |
TAGCTGTGGG |
GGTGAGGGTC |
CCATGTGGTG |
GCACAGGCCC |
CCTTGAGTGG |
GGTTATCTCT |
|
8161 |
GTGTTAGGGG |
TATATGATGG |
GGGAGTAGAT |
CTTTCTAGGA |
GGGAGACACT |
GGCCCCTCAA |
ATCGTCCAGC |
GACCTTCCTC |
|
8241 |
ATCCACCCCA |
TCCCTCCCCA |
GTTCATTGCA |
CTTTGATTAG |
CAGCGGAACA |
AGGAGTCAGA |
CATTTTAAGA |
TGGTGGCAGT |
|
8321 |
AGAGGCTATG |
GACAGGGCAT |
GCCACGTGGG |
CTCATATGGG |
GCTGGGAGTA |
GTTGTCTTTC |
CTGGCACTAA |
CGTTGAGCCC |
|
8401 |
CTGGAGGCAC |
TGAAGTGCTT |
AGTGTACTTG |
GAGTATTGGG |
GTCTGACCCC |
AAACACCTTC |
CAGCTCCTGT |
AACATACTGG |
|
8481 |
CCTGGACTGT |
TTTCTCTCGG |
CTCCCCATGT |
GTCCTGGTTC |
CCGTTTCTCC |
ACCTAGACTG |
TAAACCTCTC |
GAGGGCAGGG |
|
8561 |
ACCACACCCT |
GTACTGTTCT |
GTGTCTTTCA |
CAGCTCCTCC |
CACAATGCTG |
AATATACAGC |
AGGTGCTCAA |
TAAATGATTC |
|
8641 |
TTAGTGACTT |
T |
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>ref|Gene_ID:1026|CDKN1A|NC_000006.11:36646458...36655108 (+)
TGTATATCAGGGCCGCGCTGAGCTGCGCCAGCTGAGGTGTGAGCAGCTGCCGAAGTCAGTTCCTTGTGGAGCCGGAGCTG
GGCGCGGATTCGCCGAGGCACCGAGGCACTCAGAGGAGGTGAGAGAGCGGCGGCAGACAACAGGGGACCCCGGGCCGGCG
GCCCAGAGCCGAGCCAAGCGTGCCCGCGTGTGTCCCTGCGTGTCCGCGAGGATGCGTGTTCGCGGGTGTGTGCTGCGTTC
ACAGGTGTTTCTGCGGCAGGTGAATGACGGGCGTGGGTCGGTGCGCGCTCGGCTTGCGCACACGGTGTCTCTAAGTGCGC
GGGTGACGAGAGTCGGGATGTGCCGGAGACCCCGGGGCGGAGAGCGGGATTACAAGTACAGGAATCCCTGGTCACGCTCC
CCGCCCCTGGAAACCCAGCTGGGGCGAGGGAGGGCGTGGACGGGACCGTTCTGGGAGCTCGCCTTTGGCTGCGGTTGGCT
CCAGGCCCCAGGCGCAGTTTGCTCGCGGCGTGGGGATGAAGTCCGTGTCCCTGGAGGGGCCCAGGAAGGGCGAGGAAAGC
GGAGTGGAGTAAGTTCGTCTAGGATCGGTCCCGGGTGGCTCTGGGATCCAATCTGCGCCGCCCTGGCCCAGGTCCCAGGT
TCAGGTCCTTTACGCCACTGTGTCCACCACCTGGCTGAGCGCTGAGGTCAGCGCGGGCTGTTTCCTGGCCCTTGGGAATG
TGCCAGGACCCGTCCCCTAAGGACTAGCGAGGAGGTGACTCACTGTGACAAGGAGACCCCAGGGAACGGACTGTATGAGG
TCAGAACCCCGCCCGGGATGGGGTACAGCGGGACTCCAGAAGCCCTCTCCCCTGCCCCTTCGCGGTCTCCGTCCTCCCAT
CGGCACAGTGACCTATTTGGCTGGAACAGTTTGTTCCCAAGGAAGCCGGGCACTGGAGGTCCGGGACACCGCGTCGGGTC
CCCGCTCCGCGGCGCGCTGTAGGGGTCGGGGAGTCACGGCCCTGCTCTGGGCGGGCTCTAACCAGCCTGTCAGTCGGGGA
AGGGCAAGGGTCTCCTCTACCTCTTTCCCACCGCGGCCGGGAGAATCGCGGCCCAGCCTGTCCTCGGGTCGGGGCGCTGG
ACTCCGGGGCGGGAGCGGAGCCCACGCCTGGATGGGAGGCGGGGAGGGTTCATGTCTTTGAGGGGTGGGGGGTCTGGGGG
GCACGACGCTGCTCAGGGCCTCTATCAGCTGCCTCGGGGGCTCAGGGCTTCCCGACCTAGCCCAGATTCCCTCTCCGAAA
GCTACAGGGCTGAGCGGAGCAGGGGGGCGAGTCGCCCCCTGGGGCGCCGCCGCCTGGCGCGGACCACAGCGCGTCCTCTC
CGTCCCAAACCCCTGGGGGACACTTGCGCCCTCTTCGTGAGGAAAAGCATCTTGGAGCTGGGTTAGGAACTTGGGGCGCC
CAGGCAGCTTCCCCTCTCCTTGCCTCCCTCCACGTCGCGTTTCTGGGAGGACTTGCGAGCGGTTTTGTTTTCGTTGCTCC
CGTCTATTTTTATTTTCCAGGGATCTGACTCATCCCGTGCTTTGGGCGTGGAGATAAGGTGGAGGGGCCGGCTCCCGGCG
CGCGCGCGCGTGCGTGTCTGCGCGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTCAGAGACGG
CACAAGAGCGCGCGGTTTCCCAACAGCGGCGGGAGTTTCGGAAGCCTGGCCGGCTCAGCGTGACGTGTTCGCGGCCCCCC
GGTCCCCTCCCATTCTCCCCCTCCCCACCCCAGGGTGACGCGCAGCCGGAGTGGAAGCAGTTTTGGCGGGCGAGCAGCGC
CTTGCAGGAAACTGACTCATCACTACTCCCTCCAGCGGTCCGAGGCTCTGCCCACGCACCTCCCACTCCGCGCGTGATTT
CCTGGAGGCCGGCGCCCCCTCCCGGCCCTGGCGGGAATAGCACACAGGCTTTCCCGCGGAGTGGGGCTGGCCGGCGCGAA
CCGCCGCGGCTACTCCTGGGCTCATCCGAGATCAACCCCTATGCCATTACCACCCCTTCAAAGGAGCACTCCTTAGGTTC
AACAGTATTCACTGAGCTCTTACTGGAAATTAAAATATGGCTGAAGTCTAAGGCAGGAAGGCCAATAAAGGAGGCTATTT
TTAATTGTTTCTAAAACAAGGGTTTGCGTTTCTGAGTTTTCTTTGGGCTGAAAGTTATTATGAGCATGAGAGCAGATTTT
GATGGGGGAGGAGAGGCCTATGAGAGCCATAAGAGAAGGAGGGGTGGTAGAAGAGGAGAGGGTGCCTGCCTAGATCCTAG
TCCTGTCTTGAACTCCCGAGAGCCAGGGAATATCCAGCACCTTGATGAAGCCCTAGGCGGGCGCCTCCTCCTTGTGCCTA
TGATGTATTGAGACCCAGAATGTCCATTTCAAACATACCAGTGTGTCTCCGCTTGGCTGGCAACCCAAGAGTGCCCATCT
GAGGAATTGTGCCAAACACTTGCTTGAATCTTCAATCTGGATTAAGTTGGTCTCGGGAGGCAGGGCCTCAGCAATCTATA
TTTTGAAAAAACTCCCTAGGTGCTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC
TTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT
CTTTCTTCCTTTCTCTTTCTCTCTTTCTTTCTCTTTCTCTCTTTCTTTCTTTTCTTTCGACAGAGTTGCACTCTGTCACC
CAGGCTGGAGTGCAATGGCACCATCCTGGACTCAAGTAGTCCTCCTGTTTCAGCCTCCCAAGTAACCGGGACCACAGGCG
TGATCCCCCCGCCCCCATGCCCAGATTTTTTTTTTTTTTTTTTTTTTTTTGAGATGCGGTCTCGCTCTGTCACCCAGGCT
GGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAG
TAGCTGGGACTACAGGTGCTGCCATCATGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTT
AGCCAGGATGGTCTCAATCTCCTGACCTCGTGCTCCGCCCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGAC
ACTGCACCCAACCACCCAGCTAATTTTTATTTATTTTTATTTTTAGTAGAGACAGGGTCTCAGCTAGTTGCCCAGGCTAG
TCTTGGACCCTTGGGCTCAAATGATTCTCCCACCTCTGCCTCCCAGAGTATTAGGATTACAGGCATAAGCCACTGCCCCT
GGCCTCCCCAAGTGATTGTGATGGGCCTCTCTGGTTAAGAAACCTCAAAATTAGAGAGGGAGTGGGGTTCAATACTACAG
CACAGGACTCAGGGCAAACAGGCCTGGGTTCAGATCCTGGCTGTGCCACTTATGAACTGTGTGATGTTAGGCAAGTTACT
TAACTTATCTGAGCCTTGGTTGCCTCTTCTGTAAAAAGGGAGCTAATAGATATCCACTTTTTAGGAGGATTGATATTTTT
AAACTGCTTAGAACAGCCCCCAAACATAAAAATATATAAATAAATCCCAACTCATGCCTAGCAGAGGGTGGATAGAGGTT
ATTTGAGGGCTCTGTCCACTGTACTGGGTGACCCCTTTATGGGGCAGTGGCCTTTGGCCTTTTTAGCTGTATGACTCAGG
GGCAAGTCTCATATCTCTTCCATCTCCTGCCCTTTAAACTTGGTGTGAAGTTACCAAGAGCCTCCTCTCCCAACCAGCTG
GGACGTGAAACTGTGGGCTCCACTGATCACAAGCAGTGGGGTGAGGTGGGGTGGAGCAGATGTGGCATGTGTCCCGGGCT
TCCTGCCTCATGAGGACTCAGCAGAGCTTTCACCCCCAGAAACTGCAAGTTGGGACTTGTCCCTAGGAAAATCCAGTTGC
TGCCAAGGTCGTGCAGTCACTCAGCCCTGGAGTCAAGCCAGAGCAGGCAGGTAGGTGCCAGGGCTCCCTCATGGGCAAAC
TCACTCTCCGTTTTCCCTCTCCTGAAGGGGGAGGAGAGGAGCCAGGTAGACCAGCCACCTTTAATTTTCTTTTTGCCTGC
AAAACGGTTTCCTTGGACACAGGCAACACGAGGCAGGGGCTGCCAGGTGTCTAGACTTCAGATCACCTGATGTGCCTGGC
AGGATGTGGCTCAGCCTGGGAGAAATCATCCCTTGCGCTGCCCCGCCCGGCCCCTCCTTACCCCTAGGCCACCCGCCTGA
CGACATCCTTGGGAAAGGCCCTCAGCCTACAGCACCTGTCAGCTGCTGTCTGAAGGAGGTAGTTGGCAGGGGGAAGTGAT
AGGGGGGAGGCTCAGTAAAACTGAAGGCAGAGAGGAATAATCATACTTCTGTTTTCAATGCACTTCTCTATACGAAGTGC
TGCTGGCACGTTACCTACATTAACTCAGTTAATTCTCATGTCTATCCTCTGAGACAGTCACTATTACTATCCCCATTTTA
TAGATGAGGAAACTAGAGCTCAGACAAGTTAAGTTGCTTGCCCAGGGTCACCTAGTAAAACCTGGACTCCAGCCCAGGTG
ATCTGGCTCCAGAGCCCTCCTGCTTAACCACCAGGATACAGCCTTTCATTCAGCTCTGTTCTGTCTGCCTTGCTGCATGG
ACTCTGTGATCAATTTCTTGAGTATGTGTCTGTAGCCATGCTCTTTAAACTTGTACATGGCCCCATTTATGGATGAGGAA
ACTGAGACCTAGAGACATTAAGTGGCTTTTTAAAGCTTACGTAGTAACTGGCAGAGCTAGGACCACAACCCGGGTGCTTT
TTGCCCCAAAGTCCCGGGTACTTTTACTTGGCAGAGCAGGGTTACCCTACTTGGGGATCTGGGTCGGGGGACTTAGGAGG
CTGGAGGAACTGTCAGACTGTTTCTTCTTTTGGGAATTGACCTTCTGGCCAGGGCTGCGATTAGGAAACTGCTGGACTCT
GGCAATTCACACATATTTGGGGGGCATTCACACCCATGAGGGACACCTCTGGGGGGAAAACAAATTGATTTTAGCTGATA
ATACCTGGTGGCAAACAGGACCCTGGTCCTTGCTCTTGCAATAGACTTGCCTTTGTTGACATTAGCTTGCCCTTCAGTTG
CCTGCTCTCCCAGTGACCTTGGTGTGCCAGGCTGGCTGAGCTCTGCTGGTGGGGGTCAGGCCTCCTGTGGGAAGGAAGCA
GGAAGACCAGCTGGAAGGAGTGAGAGAGACCCTCTGGTAGGAAGACGTCACCTGAGGTGACACAGCAAAGCCCGGCCAGG
TAACATAGTGTCTAATCTCCGCCGTGACCAGGGCCTTCCTTGTATCTCTGCTGCAGGCGCCATGTCAGAACCGGCTGGGG
ATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGTGGACAGCGAGCAGCTGAGCCGCGAC
TGTGATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTGAGCGATGGAACTTCGACTTTGTCACCGAGACACCACTGGA
GGGTGACTTCGCCTGGGAGCGTGTGCGGGGCCTTGGCCTGCCCAAGCTCTACCTTCCCACGGGGCCCCGGCGAGGCCGGG
ATGAGTTGGGAGGAGGCAGGCGGCCTGGCACCTCACCTGCTCTGCTGCAGGGGACAGCAGAGGAAGACCATGTGGACCTG
TCACTGTCTTGTACCCTTGTGCCTCGCTCAGGGGAGCAGGCTGAAGGGTCCCCAGGTGGACCTGGAGACTCTCAGGGTCG
AAAACGGCGGCAGACCAGCATGACAGGTGCGGACATGTGCACGGAAGGACTTTGTAAGGGACCAGGATTCTCAGAATCCA
TGGTCCAAGGGCTGACCTGTCTGGTCCTGGTCCAGCATGCTCCAGGTAGAAGGAAACAGGCCCAGAGAGGGGAAGCAACC
TCCCTGAGGTCACACAGCAAGTAGGCAGCAAAGACCAACTAGCTAACATTTATTGGGAATGTTCATTATGCCAGGCCCTT
TGCCAAGCTTCTAAGGTAGATTTATTTAGTCCTTATAGCAATGTTATAACATAAGACATTCTTGTCACCCTGCCCGCCTT
TCTTTTTGAGACAGGTGTCTTAACTCTGTTGGCCAGACTGGAGTGCAGTGATACGATCATGGCTCACTGCAGCTTCAAAC
TCCTGGGCTCAAGCGATCTTCCTACCTCAGCCTCCTGGGTAGCTGGGAAGCTGGGACTATAGTTGTACACCACTACGCCC
GGTTAATTTTTTGAGTTTTTGTAGAGACAAGGTCTCACCATGTTGCCCGGGCTGGTCTTGAACTCCTGAGCTCAAGCAGT
CCTCCTGCCTCAGCCTCCCAAAGTGTTGTGATTACAGGCGTGAGCCACCATGCCCAGCCCCTTGCCATCCTTTTAGGGCA
AGGAAACCAGGCTCAGAGAGGTAGAGTGATTTATCTAAGGTCTCAAAGTGAATTTGCCGTTGGGTCAAGACTAATTATAA
TAACAACAACTACTGACGTTTATATGGGCCCGGCATTGTGCTGAACACTTTCATGGATTTTGTAACAGAATCCCTAGATC
AGCACTGTCCAGTAACTCTGCAGGGATGGGAGTGTCCGGTACAGGGGCCACGAGCCACATACGGCTGTTGTGCATTTGAC
ACACAGCTCATGTGACTGAGGAACTGAATTGTTCATTTTATTTGATTGTAGTCTGTTTAAACAAGCACACAGAGCTAGTA
GTGGTTCCTCTGCTGGGCAGCTTGACTTAGAGCAGACCCATGGGTGCGGGTGCGGTGATGGATAAAATCACATCTGTGAA
GCATGGTGGGACACTCCATAATACCCCTCAAGAGACAGAGTGGACGTTCCCCGAGTTCTTCCTGTTCTCAGCAGTCGGCC
CCATTGGCCCCAGGGAAGGGTGTCCTGGCCCCCCACTGTCTTCCTCAGTTGGGCAGCTCCGCCGCGTCCTCTTCTTCTTG
GCCTGGCTGACTTCTGCTGTCTCTCCTCAGATTTCTACCACTCCAAACGCCGGCTGATCTTCTCCAAGAGGAAGCCCTAA
TCCGCCCACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGCCTTAGTCTCAGTT
TGTGTGTCTTAATTATTATTTGTGTTTTAATTTAAACACCTCCTCATGTACATACCCTGGCCGCCCCCTGCCCCCCAGCC
TCTGGCATTAGAATTATTTAAACAAAAACTAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATG
AAATACTATTTAAAGCCTCCTCATCCCGTGTTCTCCTTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGC
TACTTCCTCCTCCCCACTTGTCCGCTGGGTGGTACCCTCTGGAGGGGTGTGGCTCCTTCCCATCGCTGTCACAGGCGGTT
ATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTCTTTTTCATTTGAGAAGTAAACAGATGGCACTTTGAAGGG
GCCTCACCGAGTGGGGGCATCATCAAAAACTTTGGAGTCCCCTCACCTCCTCTAAGGTTGGGCAGGGTGACCCTGAAGTG
AGCACAGCCTAGGGCTGAGCTGGGGACCTGGTACCCTCCTGGCTCTTGATACCCCCCTCTGTCTTGTGAAGGCAGGGGGA
AGGTGGGGTCCTGGAGCAGACCACCCCGCCTGCCCTCATGGCCCCTCTGACCTGCACTGGGGAGCCCGTCTCAGTGTTGA
GCCTTTTCCCTCTTTGGCTCCCCTGTACCTTTTGAGGAGCCCCAGCTACCCTTTTTCTCCAGCTGGGCTCTGCAATTCCC
CTCTGCTGCTGTCCCTCCCCCTTGTCCTTTCCCTTCAGTACCCTCTCAGCTCCAGGTGGCTCTGAGGTGCCTGTCCCACC
CCCACCCCCAGCTCAATGGACTGGAAGGGGAAGGGACACACAAGAAGAAGGGCACCCTAGTTCTACCTCAGGCAGCTCAA
GCAGCGACCGCCCCCTCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTGGGGTTATCTCT
GTGTTAGGGGTATATGATGGGGGAGTAGATCTTTCTAGGAGGGAGACACTGGCCCCTCAAATCGTCCAGCGACCTTCCTC
ATCCACCCCATCCCTCCCCAGTTCATTGCACTTTGATTAGCAGCGGAACAAGGAGTCAGACATTTTAAGATGGTGGCAGT
AGAGGCTATGGACAGGGCATGCCACGTGGGCTCATATGGGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCC
CTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTAACATACTGG
CCTGGACTGTTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAAACCTCTCGAGGGCAGGG
ACCACACCCTGTACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTGCTCAATAAATGATTC
TTAGTGACTTT
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Primary source |
RefSeq : NM_000389.3 (GI:169790847)
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Name |
Cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A), transcript variant 1
|
Type of transcript |
mRNA
|
Organism |
Homo sapiens
|
Length |
2168 nt
|
Map |
6p21.2
|
Location |
Chromosome 6 (NC_000006.11) strand : +
36646458...36646574 | 36651873...36652322 | 36653527...36655108 |
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Exon(s) |
Start |
End |
Length |
is coding |
Exon 1c
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1
|
117
|
117
|
1
|
Exon 2
|
118
|
567
|
450
|
1
|
Exon 3
|
568
|
2149
|
1582
|
1
|
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Primary source |
NCBI : CCDS4824
|
Nucleotide |
CDKN1A, mRNA isoform 1[NM_000389.3] : 123...617
|
Length |
495
|
Location |
Chromosome 6 (NC_000006.11) strand : +
36651878...36652322 | 36653527...36653576 |
|
Start codon |
1
|
Translation |
NP_000380.1 |
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1 |
GTATATCAGG |
GCCGCGCTGA |
GCTGCGCCAG |
CTGAGGTGTG |
AGCAGCTGCC |
GAAGTCAGTT |
CCTTGTGGAG |
CCGGAGCTGG |
|
81 |
GCGCGGATTC |
GCCGAGGCAC |
CGAGGCACTC |
AGAGGAGGCG |
CCATGTCAGA |
ACCGGCTGGG |
GATGTCCGTC |
AGAACCCATG |
|
161 |
CGGCAGCAAG |
GCCTGCCGCC |
GCCTCTTCGG |
CCCAGTGGAC |
AGCGAGCAGC |
TGAGCCGCGA |
CTGTGATGCG |
CTAATGGCGG |
|
241 |
GCTGCATCCA |
GGAGGCCCGT |
GAGCGATGGA |
ACTTCGACTT |
TGTCACCGAG |
ACACCACTGG |
AGGGTGACTT |
CGCCTGGGAG |
|
321 |
CGTGTGCGGG |
GCCTTGGCCT |
GCCCAAGCTC |
TACCTTCCCA |
CGGGGCCCCG |
GCGAGGCCGG |
GATGAGTTGG |
GAGGAGGCAG |
|
401 |
GCGGCCTGGC |
ACCTCACCTG |
CTCTGCTGCA |
GGGGACAGCA |
GAGGAAGACC |
ATGTGGACCT |
GTCACTGTCT |
TGTACCCTTG |
|
481 |
TGCCTCGCTC |
AGGGGAGCAG |
GCTGAAGGGT |
CCCCAGGTGG |
ACCTGGAGAC |
TCTCAGGGTC |
GAAAACGGCG |
GCAGACCAGC |
|
561 |
ATGACAGATT |
TCTACCACTC |
CAAACGCCGG |
CTGATCTTCT |
CCAAGAGGAA |
GCCCTAATCC |
GCCCACAGGA |
AGCCTGCAGT |
|
641 |
CCTGGAAGCG |
CGAGGGCCTC |
AAAGGCCCGC |
TCTACATCTT |
CTGCCTTAGT |
CTCAGTTTGT |
GTGTCTTAAT |
TATTATTTGT |
|
721 |
GTTTTAATTT |
AAACACCTCC |
TCATGTACAT |
ACCCTGGCCG |
CCCCCTGCCC |
CCCAGCCTCT |
GGCATTAGAA |
TTATTTAAAC |
|
801 |
AAAAACTAGG |
CGGTTGAATG |
AGAGGTTCCT |
AAGAGTGCTG |
GGCATTTTTA |
TTTTATGAAA |
TACTATTTAA |
AGCCTCCTCA |
|
881 |
TCCCGTGTTC |
TCCTTTTCCT |
CTCTCCCGGA |
GGTTGGGTGG |
GCCGGCTTCA |
TGCCAGCTAC |
TTCCTCCTCC |
CCACTTGTCC |
|
961 |
GCTGGGTGGT |
ACCCTCTGGA |
GGGGTGTGGC |
TCCTTCCCAT |
CGCTGTCACA |
GGCGGTTATG |
AAATTCACCC |
CCTTTCCTGG |
|
1041 |
ACACTCAGAC |
CTGAATTCTT |
TTTCATTTGA |
GAAGTAAACA |
GATGGCACTT |
TGAAGGGGCC |
TCACCGAGTG |
GGGGCATCAT |
|
1121 |
CAAAAACTTT |
GGAGTCCCCT |
CACCTCCTCT |
AAGGTTGGGC |
AGGGTGACCC |
TGAAGTGAGC |
ACAGCCTAGG |
GCTGAGCTGG |
|
1201 |
GGACCTGGTA |
CCCTCCTGGC |
TCTTGATACC |
CCCCTCTGTC |
TTGTGAAGGC |
AGGGGGAAGG |
TGGGGTCCTG |
GAGCAGACCA |
|
1281 |
CCCCGCCTGC |
CCTCATGGCC |
CCTCTGACCT |
GCACTGGGGA |
GCCCGTCTCA |
GTGTTGAGCC |
TTTTCCCTCT |
TTGGCTCCCC |
|
1361 |
TGTACCTTTT |
GAGGAGCCCC |
AGCTACCCTT |
CTTCTCCAGC |
TGGGCTCTGC |
AATTCCCCTC |
TGCTGCTGTC |
CCTCCCCCTT |
|
1441 |
GTCCTTTCCC |
TTCAGTACCC |
TCTCAGCTCC |
AGGTGGCTCT |
GAGGTGCCTG |
TCCCACCCCC |
ACCCCCAGCT |
CAATGGACTG |
|
1521 |
GAAGGGGAAG |
GGACACACAA |
GAAGAAGGGC |
ACCCTAGTTC |
TACCTCAGGC |
AGCTCAAGCA |
GCGACCGCCC |
CCTCCTCTAG |
|
1601 |
CTGTGGGGGT |
GAGGGTCCCA |
TGTGGTGGCA |
CAGGCCCCCT |
TGAGTGGGGT |
TATCTCTGTG |
TTAGGGGTAT |
ATGATGGGGG |
|
1681 |
AGTAGATCTT |
TCTAGGAGGG |
AGACACTGGC |
CCCTCAAATC |
GTCCAGCGAC |
CTTCCTCATC |
CACCCCATCC |
CTCCCCAGTT |
|
1761 |
CATTGCACTT |
TGATTAGCAG |
CGGAACAAGG |
AGTCAGACAT |
TTTAAGATGG |
TGGCAGTAGA |
GGCTATGGAC |
AGGGCATGCC |
|
1841 |
ACGTGGGCTC |
ATATGGGGCT |
GGGAGTAGTT |
GTCTTTCCTG |
GCACTAACGT |
TGAGCCCCTG |
GAGGCACTGA |
AGTGCTTAGT |
|
1921 |
GTACTTGGAG |
TATTGGGGTC |
TGACCCCAAA |
CACCTTCCAG |
CTCCTGTAAC |
ATACTGGCCT |
GGACTGTTTT |
CTCTCGGCTC |
|
2001 |
CCCATGTGTC |
CTGGTTCCCG |
TTTCTCCACC |
TAGACTGTAA |
ACCTCTCGAG |
GGCAGGGACC |
ACACCCTGTA |
CTGTTCTGTG |
|
2081 |
TCTTTCACAG |
CTCCTCCCAC |
AATGCTGAAT |
ATACAGCAGG |
TGCTCAATAA |
ATGATTCTTA |
GTGACTTTAA |
AAAAAAAAAA |
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2161 |
AAAAAAAA |
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>gi|169790847|ref|NM_000389.3|Cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A), transcript variant 1
GTATATCAGGGCCGCGCTGAGCTGCGCCAGCTGAGGTGTGAGCAGCTGCCGAAGTCAGTTCCTTGTGGAGCCGGAGCTGG
GCGCGGATTCGCCGAGGCACCGAGGCACTCAGAGGAGGCGCCATGTCAGAACCGGCTGGGGATGTCCGTCAGAACCCATG
CGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGTGGACAGCGAGCAGCTGAGCCGCGACTGTGATGCGCTAATGGCGG
GCTGCATCCAGGAGGCCCGTGAGCGATGGAACTTCGACTTTGTCACCGAGACACCACTGGAGGGTGACTTCGCCTGGGAG
CGTGTGCGGGGCCTTGGCCTGCCCAAGCTCTACCTTCCCACGGGGCCCCGGCGAGGCCGGGATGAGTTGGGAGGAGGCAG
GCGGCCTGGCACCTCACCTGCTCTGCTGCAGGGGACAGCAGAGGAAGACCATGTGGACCTGTCACTGTCTTGTACCCTTG
TGCCTCGCTCAGGGGAGCAGGCTGAAGGGTCCCCAGGTGGACCTGGAGACTCTCAGGGTCGAAAACGGCGGCAGACCAGC
ATGACAGATTTCTACCACTCCAAACGCCGGCTGATCTTCTCCAAGAGGAAGCCCTAATCCGCCCACAGGAAGCCTGCAGT
CCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGCCTTAGTCTCAGTTTGTGTGTCTTAATTATTATTTGT
GTTTTAATTTAAACACCTCCTCATGTACATACCCTGGCCGCCCCCTGCCCCCCAGCCTCTGGCATTAGAATTATTTAAAC
AAAAACTAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAATACTATTTAAAGCCTCCTCA
TCCCGTGTTCTCCTTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCCTCCCCACTTGTCC
GCTGGGTGGTACCCTCTGGAGGGGTGTGGCTCCTTCCCATCGCTGTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGG
ACACTCAGACCTGAATTCTTTTTCATTTGAGAAGTAAACAGATGGCACTTTGAAGGGGCCTCACCGAGTGGGGGCATCAT
CAAAAACTTTGGAGTCCCCTCACCTCCTCTAAGGTTGGGCAGGGTGACCCTGAAGTGAGCACAGCCTAGGGCTGAGCTGG
GGACCTGGTACCCTCCTGGCTCTTGATACCCCCCTCTGTCTTGTGAAGGCAGGGGGAAGGTGGGGTCCTGGAGCAGACCA
CCCCGCCTGCCCTCATGGCCCCTCTGACCTGCACTGGGGAGCCCGTCTCAGTGTTGAGCCTTTTCCCTCTTTGGCTCCCC
TGTACCTTTTGAGGAGCCCCAGCTACCCTTCTTCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTT
GTCCTTTCCCTTCAGTACCCTCTCAGCTCCAGGTGGCTCTGAGGTGCCTGTCCCACCCCCACCCCCAGCTCAATGGACTG
GAAGGGGAAGGGACACACAAGAAGAAGGGCACCCTAGTTCTACCTCAGGCAGCTCAAGCAGCGACCGCCCCCTCCTCTAG
CTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTGGGGTTATCTCTGTGTTAGGGGTATATGATGGGGG
AGTAGATCTTTCTAGGAGGGAGACACTGGCCCCTCAAATCGTCCAGCGACCTTCCTCATCCACCCCATCCCTCCCCAGTT
CATTGCACTTTGATTAGCAGCGGAACAAGGAGTCAGACATTTTAAGATGGTGGCAGTAGAGGCTATGGACAGGGCATGCC
ACGTGGGCTCATATGGGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTGAAGTGCTTAGT
GTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTAACATACTGGCCTGGACTGTTTTCTCTCGGCTC
CCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTG
TCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTGCTCAATAAATGATTCTTAGTGACTTTAAAAAAAAAAAA
AAAAAAAA
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Primary source |
RefSeq : NM_078467.1 (GI:17978494)
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Name |
Cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A), transcript variant 2
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Type of transcript |
mRNA
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Organism |
Homo sapiens
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Length |
2281 nt
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Map |
6p21.2
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Location |
Chromosome 6 (NC_000006.11) strand : +
36646486...36646715 | 36651873...36652322 | 36653527...36655108 |
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Exon(s) |
Start |
End |
Length |
is coding |
Exon 1b
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1
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230
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230
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1
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Exon 2
|
231
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680
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450
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1
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Exon 3
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681
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2262
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1582
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1
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ID |
Class |
Location |
Mutation |
Length |
is synonymous |
Source |
rs71780222
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insertion
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226
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-/largedeletion
|
13
|
?
|
dbSNP
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Primary source |
NCBI : CCDS4824
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Nucleotide |
CDKN1A, mRNA isoform 2[NM_078467.1] : 236...730
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Length |
495
|
Location |
Chromosome 6 (NC_000006.11) strand : +
36651878...36652322 | 36653527...36653576 |
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Start codon |
1
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Translation |
NP_510867.1 |
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1 |
AGCTGAGGTG |
TGAGCAGCTG |
CCGAAGTCAG |
TTCCTTGTGG |
AGCCGGAGCT |
GGGCGCGGAT |
TCGCCGAGGC |
ACCGAGGCAC |
|
81 |
TCAGAGGAGG |
TGAGAGAGCG |
GCGGCAGACA |
ACAGGGGACC |
CCGGGCCGGC |
GGCCCAGAGC |
CGAGCCAAGC |
GTGCCCGCGT |
|
161 |
GTGTCCCTGC |
GTGTCCGCGA |
GGATGCGTGT |
TCGCGGGTGT |
GTGCTGCGTT |
CACAGGTGTT |
TCTGCGGCAG |
GCGCCATGTC |
|
241 |
AGAACCGGCT |
GGGGATGTCC |
GTCAGAACCC |
ATGCGGCAGC |
AAGGCCTGCC |
GCCGCCTCTT |
CGGCCCAGTG |
GACAGCGAGC |
|
321 |
AGCTGAGCCG |
CGACTGTGAT |
GCGCTAATGG |
CGGGCTGCAT |
CCAGGAGGCC |
CGTGAGCGAT |
GGAACTTCGA |
CTTTGTCACC |
|
401 |
GAGACACCAC |
TGGAGGGTGA |
CTTCGCCTGG |
GAGCGTGTGC |
GGGGCCTTGG |
CCTGCCCAAG |
CTCTACCTTC |
CCACGGGGCC |
|
481 |
CCGGCGAGGC |
CGGGATGAGT |
TGGGAGGAGG |
CAGGCGGCCT |
GGCACCTCAC |
CTGCTCTGCT |
GCAGGGGACA |
GCAGAGGAAG |
|
561 |
ACCATGTGGA |
CCTGTCACTG |
TCTTGTACCC |
TTGTGCCTCG |
CTCAGGGGAG |
CAGGCTGAAG |
GGTCCCCAGG |
TGGACCTGGA |
|
641 |
GACTCTCAGG |
GTCGAAAACG |
GCGGCAGACC |
AGCATGACAG |
ATTTCTACCA |
CTCCAAACGC |
CGGCTGATCT |
TCTCCAAGAG |
|
721 |
GAAGCCCTAA |
TCCGCCCACA |
GGAAGCCTGC |
AGTCCTGGAA |
GCGCGAGGGC |
CTCAAAGGCC |
CGCTCTACAT |
CTTCTGCCTT |
|
801 |
AGTCTCAGTT |
TGTGTGTCTT |
AATTATTATT |
TGTGTTTTAA |
TTTAAACACC |
TCCTCATGTA |
CATACCCTGG |
CCGCCCCCTG |
|
881 |
CCCCCCAGCC |
TCTGGCATTA |
GAATTATTTA |
AACAAAAACT |
AGGCGGTTGA |
ATGAGAGGTT |
CCTAAGAGTG |
CTGGGCATTT |
|
961 |
TTATTTTATG |
AAATACTATT |
TAAAGCCTCC |
TCATCCCGTG |
TTCTCCTTTT |
CCTCTCTCCC |
GGAGGTTGGG |
TGGGCCGGCT |
|
1041 |
TCATGCCAGC |
TACTTCCTCC |
TCCCCACTTG |
TCCGCTGGGT |
GGTACCCTCT |
GGAGGGGTGT |
GGCTCCTTCC |
CATCGCTGTC |
|
1121 |
ACAGGCGGTT |
ATGAAATTCA |
CCCCCTTTCC |
TGGACACTCA |
GACCTGAATT |
CTTTTTCATT |
TGAGAAGTAA |
ACAGATGGCA |
|
1201 |
CTTTGAAGGG |
GCCTCACCGA |
GTGGGGGCAT |
CATCAAAAAC |
TTTGGAGTCC |
CCTCACCTCC |
TCTAAGGTTG |
GGCAGGGTGA |
|
1281 |
CCCTGAAGTG |
AGCACAGCCT |
AGGGCTGAGC |
TGGGGACCTG |
GTACCCTCCT |
GGCTCTTGAT |
ACCCCCCTCT |
GTCTTGTGAA |
|
1361 |
GGCAGGGGGA |
AGGTGGGGTC |
CTGGAGCAGA |
CCACCCCGCC |
TGCCCTCATG |
GCCCCTCTGA |
CCTGCACTGG |
GGAGCCCGTC |
|
1441 |
TCAGTGTTGA |
GCCTTTTCCC |
TCTTTGGCTC |
CCCTGTACCT |
TTTGAGGAGC |
CCCAGCTACC |
CTTCTTCTCC |
AGCTGGGCTC |
|
1521 |
TGCAATTCCC |
CTCTGCTGCT |
GTCCCTCCCC |
CTTGTCCTTT |
CCCTTCAGTA |
CCCTCTCAGC |
TCCAGGTGGC |
TCTGAGGTGC |
|
1601 |
CTGTCCCACC |
CCCACCCCCA |
GCTCAATGGA |
CTGGAAGGGG |
AAGGGACACA |
CAAGAAGAAG |
GGCACCCTAG |
TTCTACCTCA |
|
1681 |
GGCAGCTCAA |
GCAGCGACCG |
CCCCCTCCTC |
TAGCTGTGGG |
GGTGAGGGTC |
CCATGTGGTG |
GCACAGGCCC |
CCTTGAGTGG |
|
1761 |
GGTTATCTCT |
GTGTTAGGGG |
TATATGATGG |
GGGAGTAGAT |
CTTTCTAGGA |
GGGAGACACT |
GGCCCCTCAA |
ATCGTCCAGC |
|
1841 |
GACCTTCCTC |
ATCCACCCCA |
TCCCTCCCCA |
GTTCATTGCA |
CTTTGATTAG |
CAGCGGAACA |
AGGAGTCAGA |
CATTTTAAGA |
|
1921 |
TGGTGGCAGT |
AGAGGCTATG |
GACAGGGCAT |
GCCACGTGGG |
CTCATATGGG |
GCTGGGAGTA |
GTTGTCTTTC |
CTGGCACTAA |
|
2001 |
CGTTGAGCCC |
CTGGAGGCAC |
TGAAGTGCTT |
AGTGTACTTG |
GAGTATTGGG |
GTCTGACCCC |
AAACACCTTC |
CAGCTCCTGT |
|
2081 |
AACATACTGG |
CCTGGACTGT |
TTTCTCTCGG |
CTCCCCATGT |
GTCCTGGTTC |
CCGTTTCTCC |
ACCTAGACTG |
TAAACCTCTC |
|
2161 |
GAGGGCAGGG |
ACCACACCCT |
GTACTGTTCT |
GTGTCTTTCA |
CAGCTCCTCC |
CACAATGCTG |
AATATACAGC |
AGGTGCTCAA |
|
2241 |
TAAATGATTC |
TTAGTGACTT |
TAAAAAAAAA |
AAAAAAAAAA |
A |
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>gi|17978494|ref|NM_078467.1|Cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A), transcript variant 2
AGCTGAGGTGTGAGCAGCTGCCGAAGTCAGTTCCTTGTGGAGCCGGAGCTGGGCGCGGATTCGCCGAGGCACCGAGGCAC
TCAGAGGAGGTGAGAGAGCGGCGGCAGACAACAGGGGACCCCGGGCCGGCGGCCCAGAGCCGAGCCAAGCGTGCCCGCGT
GTGTCCCTGCGTGTCCGCGAGGATGCGTGTTCGCGGGTGTGTGCTGCGTTCACAGGTGTTTCTGCGGCAGGCGCCATGTC
AGAACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGTGGACAGCGAGC
AGCTGAGCCGCGACTGTGATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTGAGCGATGGAACTTCGACTTTGTCACC
GAGACACCACTGGAGGGTGACTTCGCCTGGGAGCGTGTGCGGGGCCTTGGCCTGCCCAAGCTCTACCTTCCCACGGGGCC
CCGGCGAGGCCGGGATGAGTTGGGAGGAGGCAGGCGGCCTGGCACCTCACCTGCTCTGCTGCAGGGGACAGCAGAGGAAG
ACCATGTGGACCTGTCACTGTCTTGTACCCTTGTGCCTCGCTCAGGGGAGCAGGCTGAAGGGTCCCCAGGTGGACCTGGA
GACTCTCAGGGTCGAAAACGGCGGCAGACCAGCATGACAGATTTCTACCACTCCAAACGCCGGCTGATCTTCTCCAAGAG
GAAGCCCTAATCCGCCCACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGCCTT
AGTCTCAGTTTGTGTGTCTTAATTATTATTTGTGTTTTAATTTAAACACCTCCTCATGTACATACCCTGGCCGCCCCCTG
CCCCCCAGCCTCTGGCATTAGAATTATTTAAACAAAAACTAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTT
TTATTTTATGAAATACTATTTAAAGCCTCCTCATCCCGTGTTCTCCTTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCT
TCATGCCAGCTACTTCCTCCTCCCCACTTGTCCGCTGGGTGGTACCCTCTGGAGGGGTGTGGCTCCTTCCCATCGCTGTC
ACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTCTTTTTCATTTGAGAAGTAAACAGATGGCA
CTTTGAAGGGGCCTCACCGAGTGGGGGCATCATCAAAAACTTTGGAGTCCCCTCACCTCCTCTAAGGTTGGGCAGGGTGA
CCCTGAAGTGAGCACAGCCTAGGGCTGAGCTGGGGACCTGGTACCCTCCTGGCTCTTGATACCCCCCTCTGTCTTGTGAA
GGCAGGGGGAAGGTGGGGTCCTGGAGCAGACCACCCCGCCTGCCCTCATGGCCCCTCTGACCTGCACTGGGGAGCCCGTC
TCAGTGTTGAGCCTTTTCCCTCTTTGGCTCCCCTGTACCTTTTGAGGAGCCCCAGCTACCCTTCTTCTCCAGCTGGGCTC
TGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTTTCCCTTCAGTACCCTCTCAGCTCCAGGTGGCTCTGAGGTGC
CTGTCCCACCCCCACCCCCAGCTCAATGGACTGGAAGGGGAAGGGACACACAAGAAGAAGGGCACCCTAGTTCTACCTCA
GGCAGCTCAAGCAGCGACCGCCCCCTCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTGG
GGTTATCTCTGTGTTAGGGGTATATGATGGGGGAGTAGATCTTTCTAGGAGGGAGACACTGGCCCCTCAAATCGTCCAGC
GACCTTCCTCATCCACCCCATCCCTCCCCAGTTCATTGCACTTTGATTAGCAGCGGAACAAGGAGTCAGACATTTTAAGA
TGGTGGCAGTAGAGGCTATGGACAGGGCATGCCACGTGGGCTCATATGGGGCTGGGAGTAGTTGTCTTTCCTGGCACTAA
CGTTGAGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGT
AACATACTGGCCTGGACTGTTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAAACCTCTC
GAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTGCTCAA
TAAATGATTCTTAGTGACTTTAAAAAAAAAAAAAAAAAAAA
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Exon number |
1c
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Length |
117 nt
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Location |
Chromosome 6 (NC_000006.11) : 36646458...36646574 (+)
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Is part of |
CDKN1A, mRNA isoform 1
(NM_000389.3)
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Sequence |
Show
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GTATATCAGGGCCGCGCTGAGCTGCGCCAGCTGAGGTGTGAGCAGCTGCCGAAGTCAGTTCCTTGTGGAGCCGGAGCTGG
GCGCGGATTCGCCGAGGCACCGAGGCACTCAGAGGAG
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Exon number |
1b
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Length |
230 nt
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Location |
Chromosome 6 (NC_000006.11) : 36646486...36646715 (+)
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Is part of |
CDKN1A, mRNA isoform 2
(NM_078467.1)
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Sequence |
Show
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AGCTGAGGTGTGAGCAGCTGCCGAAGTCAGTTCCTTGTGGAGCCGGAGCTGGGCGCGGATTCGCCGAGGCACCGAGGCAC
TCAGAGGAGGTGAGAGAGCGGCGGCAGACAACAGGGGACCCCGGGCCGGCGGCCCAGAGCCGAGCCAAGCGTGCCCGCGT
GTGTCCCTGCGTGTCCGCGAGGATGCGTGTTCGCGGGTGTGTGCTGCGTTCACAGGTGTTTCTGCGGCAG
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Exon number |
2
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Length |
450 nt
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Location |
Chromosome 6 (NC_000006.11) : 36651873...36652322 (+)
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Is part of |
CDKN1A, mRNA isoform 1
(NM_000389.3)
CDKN1A, mRNA isoform 2
(NM_078467.1)
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Sequence |
Show
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GCGCCATGTCAGAACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGTG
GACAGCGAGCAGCTGAGCCGCGACTGTGATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTGAGCGATGGAACTTCGA
CTTTGTCACCGAGACACCACTGGAGGGTGACTTCGCCTGGGAGCGTGTGCGGGGCCTTGGCCTGCCCAAGCTCTACCTTC
CCACGGGGCCCCGGCGAGGCCGGGATGAGTTGGGAGGAGGCAGGCGGCCTGGCACCTCACCTGCTCTGCTGCAGGGGACA
GCAGAGGAAGACCATGTGGACCTGTCACTGTCTTGTACCCTTGTGCCTCGCTCAGGGGAGCAGGCTGAAGGGTCCCCAGG
TGGACCTGGAGACTCTCAGGGTCGAAAACGGCGGCAGACCAGCATGACAG
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Exon number |
3
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Length |
1582 nt
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Location |
Chromosome 6 (NC_000006.11) : 36653527...36655108 (+)
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Is part of |
CDKN1A, mRNA isoform 1
(NM_000389.3)
CDKN1A, mRNA isoform 2
(NM_078467.1)
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Sequence |
Show
|
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ATTTCTACCACTCCAAACGCCGGCTGATCTTCTCCAAGAGGAAGCCCTAATCCGCCCACAGGAAGCCTGCAGTCCTGGAA
GCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGCCTTAGTCTCAGTTTGTGTGTCTTAATTATTATTTGTGTTTTAA
TTTAAACACCTCCTCATGTACATACCCTGGCCGCCCCCTGCCCCCCAGCCTCTGGCATTAGAATTATTTAAACAAAAACT
AGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAATACTATTTAAAGCCTCCTCATCCCGTG
TTCTCCTTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCCTCCCCACTTGTCCGCTGGGT
GGTACCCTCTGGAGGGGTGTGGCTCCTTCCCATCGCTGTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCA
GACCTGAATTCTTTTTCATTTGAGAAGTAAACAGATGGCACTTTGAAGGGGCCTCACCGAGTGGGGGCATCATCAAAAAC
TTTGGAGTCCCCTCACCTCCTCTAAGGTTGGGCAGGGTGACCCTGAAGTGAGCACAGCCTAGGGCTGAGCTGGGGACCTG
GTACCCTCCTGGCTCTTGATACCCCCCTCTGTCTTGTGAAGGCAGGGGGAAGGTGGGGTCCTGGAGCAGACCACCCCGCC
TGCCCTCATGGCCCCTCTGACCTGCACTGGGGAGCCCGTCTCAGTGTTGAGCCTTTTCCCTCTTTGGCTCCCCTGTACCT
TTTGAGGAGCCCCAGCTACCCTTCTTCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTTT
CCCTTCAGTACCCTCTCAGCTCCAGGTGGCTCTGAGGTGCCTGTCCCACCCCCACCCCCAGCTCAATGGACTGGAAGGGG
AAGGGACACACAAGAAGAAGGGCACCCTAGTTCTACCTCAGGCAGCTCAAGCAGCGACCGCCCCCTCCTCTAGCTGTGGG
GGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTGGGGTTATCTCTGTGTTAGGGGTATATGATGGGGGAGTAGAT
CTTTCTAGGAGGGAGACACTGGCCCCTCAAATCGTCCAGCGACCTTCCTCATCCACCCCATCCCTCCCCAGTTCATTGCA
CTTTGATTAGCAGCGGAACAAGGAGTCAGACATTTTAAGATGGTGGCAGTAGAGGCTATGGACAGGGCATGCCACGTGGG
CTCATATGGGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTG
GAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTAACATACTGGCCTGGACTGTTTTCTCTCGGCTCCCCATGT
GTCCTGGTTCCCGTTTCTCCACCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTTTCA
CAGCTCCTCCCACAATGCTGAATATACAGCAGGTGCTCAATAAATGATTCTTAGTGACTTTA
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Primary source |
Uniprot : P38936
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Name |
Cyclin-dependent kinase inhibitor 1
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Alternative name(s) |
CDK-interacting protein 1 Melanoma differentiation-associated protein 6 p21
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Synonym(s) |
MDA-6
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Organism |
Homo sapiens
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Length |
164 aa
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Protein existence |
---
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General annotation (Comments)
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top
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Function
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May be the important intermediate by which p53 mediates its role as an inhibitor of cellular proliferation in response to DNA damage. Binds to and inhibits cyclin-dependent kinase activity, preventing phosphorylation of critical cyclin-dependent kinase substrates and blocking cell cycle progression.
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Induction
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By p53, mezerein (antileukemic compound) and interferon beta.
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Ptm
|
Phosphorylation of Thr-145 by Akt or of Ser-146 by PKC impairs binding to PCNA.
Ubiquitinated by MKRN1; leading to polyubiquitination and 26S proteasome-dependent degradation.
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Similarity
|
Belongs to the CDI family.
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Subcellular location
|
Cytoplasm. Nucleus.
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Subunit
|
Interacts with MKRN1. Interacts with PSMA3.
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Tissue specificity
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Expressed in all adult human tissues, with 5- fold lower levels observed in the brain.
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Biological process
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G1/S transition of mitotic cell cycle [GO:0000082]
G2/M transition of mitotic cell cycle [GO:0000086]
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest [GO:0006977]
cell cycle arrest [GO:0007050]
Ras protein signal transduction [GO:0007265]
negative regulation of cell proliferation [GO:0008285]
induction of apoptosis by intracellular signals [GO:0008629]
senescence [GO:0010149]
negative regulation of cell growth [GO:0030308]
cellular response to extracellular stimulus [GO:0031668]
negative regulation of phosphorylation [GO:0042326]
positive regulation of fibroblast proliferation [GO:0048146]
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Cellular component
|
cyclin-dependent protein kinase holoenzyme complex [GO:0000307]
nucleoplasm [GO:0005654]
cytosol [GO:0005829]
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Molecular function
|
cyclin-dependent protein kinase inhibitor activity [GO:0004861]
metal ion binding [GO:0046872]
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With
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Uniprot accession
|
IntAct
|
CDC7
|
O00311
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EBI-375077,EBI-374980
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PCNA
|
P12004
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EBI-375077,EBI-358311
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GMNN
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O75496
|
EBI-375077,EBI-371669
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C7orf20
|
Q7L5D6
|
EBI-375077,EBI-711823
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CDC6
|
Q99741
|
EBI-375077,EBI-374862
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CDC45L
|
O75419
|
EBI-375077,EBI-374969
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HDAC11
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Q96DB2
|
EBI-375077,EBI-301713
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CCNB2
|
O95067
|
EBI-375077,EBI-375024
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TEX11
|
Q8IYF3
|
EBI-375077,EBI-742397
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ITGB1BP3
|
Q9NPI5
|
EBI-375077,EBI-514059
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CDK4
|
P11802
|
EBI-375077,EBI-295644
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RPS27A
|
P62988
|
EBI-375077,EBI-413034
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CCNA2
|
P20248
|
EBI-375077,EBI-457097
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CCDC85B
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Q15834
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EBI-375077,EBI-739674
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CDK6
|
Q00534
|
EBI-375077,EBI-295663
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CCND1
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P24385
|
EBI-375077,EBI-375001
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CCNA1
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P78396
|
EBI-375077,EBI-375065
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CCNE2
|
O96020
|
EBI-375077,EBI-375033
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CDK2
|
P24941
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EBI-375077,EBI-375096
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CDK5
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Q00535
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EBI-375077,EBI-1041567
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CDC5L
|
Q99459
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EBI-375077,EBI-374880
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SLC25A11
|
Q02978
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EBI-375077,EBI-359174
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CDK14
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O94921
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EBI-375077,EBI-1043945
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CCND3
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P30281
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EBI-375077,EBI-375013
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C1orf123
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Q9NWV4
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EBI-375077,EBI-724109
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GBLP
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P63244
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EBI-375077,EBI-296739
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pcn1 (xeno)
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Q03392
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EBI-375077,EBI-768724
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MCM10
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Q7L590
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EBI-375077,EBI-374912
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CCNE1
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P24864
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EBI-375077,EBI-519526
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Alternative product(s)
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top
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Feature key |
Position
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Length
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Description
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Feature identifier
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Molecule processing |
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Initiator methionine
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1 - 1
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1
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Removed
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P38936-INIT_MET-1
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Region |
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Motif
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141 - 156
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16
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Nuclear localization signal (Potential)
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P38936-MOTIF-141
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Zinc finger
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13 - 41
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29
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C4-type (Potential)
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P38936-ZN_FING-13
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Natural variations |
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Natural variant site
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4 - 4
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1
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P -> L (in dbSNP:rs4986866)
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VAR_048686
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Natural variant site
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31 - 31
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1
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S -> R (in dbSNP:rs1801270)
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VAR_011870
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Natural variant site
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63 - 63
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1
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F -> L (in dbSNP:rs4986867)
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VAR_048687
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Natural variant site
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149 - 149
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1
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D -> G (in dbSNP:rs1801724)
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VAR_014875
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Amino acid modifications |
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Modified residue
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2 - 2
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1
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N-acetylserine
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P38936-MOD_RES-2
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Modified residue
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130 - 130
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1
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Phosphoserine
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P38936-MOD_RES-130
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Modified residue
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145 - 145
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1
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Phosphothreonine; by PKA and PKB/AKT1
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P38936-MOD_RES-145
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Modified residue
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146 - 146
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1
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Phosphoserine; by PKC
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P38936-MOD_RES-146
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Modified residue
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160 - 160
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1
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Phosphoserine; by PKC; in vitro
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P38936-MOD_RES-160
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Experimental info |
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Mutagenesis
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145 - 145
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1
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T->D: No interaction with PCNA; 59% inhibition of CDK2 binding; modest inhibition of CDK4 binding; no change in subcellular location
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P38936-MUTAGEN-145
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Mutagenesis
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146 - 146
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1
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S->D: Reduces interaction with PCNA
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P38936-MUTAGEN-146
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1 |
MSEPAGDVRQ |
NPCGSKACRR |
LFGPVDSEQL |
SRDCDALMAG |
CIQEARERWN |
FDFVTETPLE |
GDFAWERVRG |
LGLPKLYLPT |
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81 |
GPRRGRDELG |
GGRRPGTSPA |
LLQGTAEEDH |
VDLSLSCTLV |
PRSGEQAEGS |
PGGPGDSQGR |
KRRQTSMTDF |
YHSKRRLIFS |
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161 |
KRKP |
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>sp|P38936|CDN1A_human Cyclin-dependent kinase inhibitor 1
MSEPAGDVRQNPCGSKACRRLFGPVDSEQLSRDCDALMAGCIQEARERWNFDFVTETPLEGDFAWERVRGLGLPKLYLPT
GPRRGRDELGGGRRPGTSPALLQGTAEEDHVDLSLSCTLVPRSGEQAEGSPGGPGDSQGRKRRQTSMTDFYHSKRRLIFS
KRKP
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Primary source |
Uniprot : Q6FI05
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Name |
CDKN1A protein [submitted name]
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Alternative name(s) |
Cyclin-dependent kinase inhibitor 1A (P21, Cip1) [submitted name] Cyclin-dependent kinase inhibitor 1A (P21, Cip1), isoform CRA_a [submitted name] Cyclin-dependent kinase inhibitor 1A [submitted name]
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Synonym(s) |
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Organism |
Homo sapiens
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Length |
164 aa
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Protein existence |
---
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General annotation (Comments)
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top
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Biological process
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response to gamma radiation [GO:0010332]
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Cellular component
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cytosol [GO:0005829]
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Molecular function
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cyclin-dependent protein kinase inhibitor activity [GO:0004861]
kinase activity [GO:0016301]
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With
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Uniprot accession
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IntAct
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Alternative product(s)
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top
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Feature key |
Position
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Length
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Description
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Feature identifier
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1 |
MSEPAGDVRQ |
NPCGSKACRR |
LFGPVDSEQL |
SRDCDALMAG |
CIQEARERWN |
FDFVTETPLE |
GDFAWERVRG |
LGLPKLYLPT |
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81 |
GPRRGRDELG |
GGRRPGTSPA |
LLQGTAEEDH |
VDLSLSCTLV |
PRSGEQAEGS |
PGGPGDSQGR |
KRRQTSMTDF |
YHSKRRLIFS |
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161 |
KRKP |
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>sp|Q6FI05|Q6FI05_human CDKN1A protein [submitted name]
MSEPAGDVRQNPCGSKACRRLFGPVDSEQLSRDCDALMAGCIQEARERWNFDFVTETPLEGDFAWERVRGLGLPKLYLPT
GPRRGRDELGGGRRPGTSPALLQGTAEEDHVDLSLSCTLVPRSGEQAEGSPGGPGDSQGRKRRQTSMTDFYHSKRRLIFS
KRKP
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