(WDR45) WD repeat domain 45 [Homo sapiens] |
|
|
|
|
|
|
Gene
Transcript(s)
Exon(s)
Protein(s)
|
|
Accession
|
149
|
Official symbol
|
WDR45
|
Official name
|
WD repeat domain 45
|
Gene type
|
gene with protein product
|
Organism
|
Homo sapiens
|
Location
|
Chromosome X (NC_000023.10) : 48932091...48958058 (-)
|
Map
|
Xp11.23
|
Length
|
25968 nt
|
NM_007075.3
|
WDR45, mRNA isoform 1
|
NM_001029896.1
|
WDR45, mRNA isoform 2
|
Accession
|
Name
|
Organism
|
Length
|
Q9Y484
|
WD repeat domain phosphoinositide-interacting protein 4
|
Homo sapiens
|
360 aa
|
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Synonyms |
WIPI-4; WIPI4; WDRX1; JM5
|
Alternative name(s) |
wD repeat domain 45; WD45 repeat protein interacting with phosphoinositides 4; WD repeat domain, X-linked 1
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Summary |
This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 amino acids typically bracketed by gly-his and trp-asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein complexes. Members of this family are involved in a variety of cellular processes, including cell cycle progression, signal transduction, apoptosis, and gene regulation. This gene has a pseudogene at chromosome 4q31.3. Multiple alternatively spliced transcript variants encoding distinct isoforms have been found for this gene, but the biological validity and full-length nature of some variants have not been determined.
|
|
|
|
|
|
|
|
|
|
|
|
|
Related Articles in PubMed
|
|
|
|
|
|
|
|
|
|
|
|
Go to ensembl
|
|
|
|
|
|
|
|
|
|
|
|
|
>ref|Gene_ID:11152|WDR45|NC_000023.10:48932091...48958058 (-)
|
|
|
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Primary source |
RefSeq : NM_007075.3 (GI:71483644)
|
Name |
WD repeat domain 45 (WDR45), transcript variant 1
|
Type of transcript |
mRNA
|
Organism |
Homo sapiens
|
Length |
1925 nt
|
Map |
Xp11.23
|
Location |
Chromosome X (NC_000023.10) strand : -
48932091...48932570 | 48932794...48932939 | 48933022...48933123 | 48933203...48933411 |
48933524...48933603 | 48934088...48934182 | 48934303...48934411 | 48935301...48935405 |
48935495...48935569 | 48935699...48935770 | 48957142...48957491 | 48957987...48958058 |
|
|
|
|
|
|
|
|
|
|
|
|
|
Exon(s) |
Start |
End |
Length |
is coding |
Exon 1
|
1
|
72
|
72
|
1
|
Exon 2
|
73
|
422
|
350
|
1
|
Exon 4
|
423
|
494
|
72
|
1
|
Exon 5
|
495
|
569
|
75
|
1
|
Exon 6
|
570
|
674
|
105
|
1
|
Exon 7a
|
675
|
783
|
109
|
1
|
Exon 8
|
784
|
878
|
95
|
1
|
Exon 9
|
879
|
958
|
80
|
1
|
Exon 10
|
959
|
1167
|
209
|
1
|
Exon 11
|
1168
|
1269
|
102
|
1
|
Exon 12
|
1270
|
1415
|
146
|
1
|
Exon 13
|
1416
|
1895
|
480
|
1
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Primary source |
NCBI : CCDS14318
|
Nucleotide |
WDR45, mRNA isoform 1[NM_007075.3] : 440...1525
|
Length |
1086
|
Location |
Chromosome X (NC_000023.10) strand : -
48932461...48932570 | 48932794...48932939 | 48933022...48933123 | 48933203...48933411 |
48933524...48933603 | 48934088...48934182 | 48934303...48934411 | 48935301...48935405 |
48935495...48935569 | 48935699...48935753 |
|
Start codon |
1
|
Translation |
NP_009006.2 |
|
|
|
|
|
|
|
|
|
|
|
|
1 |
GGCTCCCACA |
CCACTGCCTC |
GTGTGGGGTT |
GTTCGCCCGT |
GAAGGGGCAG |
GACAGGGTGC |
GCGCTGGTGG |
AGGTTGAAAT |
|
81 |
TGTTACATTT |
TGGCCGGGCG |
CGGTGGCTCA |
CGCCTGTAAT |
CCCAGCACTT |
TGGGAGGCCG |
AGGCAGGTGG |
ATCACGAGGT |
|
161 |
CAGGAGATCG |
AGACCATCCT |
GGCTAACACA |
GTGAAACCCC |
GTCTCTACTA |
AAAAAATACA |
AAAAATCAGC |
CGGGCGTGGT |
|
241 |
GACGGGCGCC |
TGTAGTCCCA |
GCTACTCAGG |
AGGCTGAGGC |
AGGAGGATGG |
CGTGAACCCG |
GGAGGCGGAG |
CTTGCAGTGA |
|
321 |
GCCGAGATCG |
CGCCAGTGCA |
CTCCAGCCTG |
GGCGACAGAG |
CGAAACTACG |
TCTCAAAAAA |
AAAAAAAAAG |
AAAGAAAAGA |
|
401 |
AATTGTTACA |
TTTTATATAT |
ATAGGAACAA |
TCCTGCACCA |
TGACTCAACA |
GCCACTTCGA |
GGAGTGACCA |
GCCTGCGTTT |
|
481 |
CAACCAAGAC |
CAAAGCTGCT |
TTTGCTGCGC |
CATGGAGACA |
GGTGTGCGCA |
TCTACAACGT |
GGAGCCCTTG |
ATGGAGAAGG |
|
561 |
GGCATCTGGA |
CCACGAGCAG |
GTGGGCAGCA |
TGGGCTTGGT |
GGAGATGCTG |
CACCGCTCCA |
ACCTTCTGGC |
CTTGGTGGGC |
|
641 |
GGTGGTAGTA |
GTCCCAAGTT |
CTCAGAGATC |
TCAGCAGTGC |
TGATCTGGGA |
CGATGCCCGG |
GAGGGCAAGG |
ACTCCAAGGA |
|
721 |
GAAGCTGGTG |
CTGGAGTTCA |
CCTTCACCAA |
GCCAGTGCTT |
TCTGTGCGCA |
TGCGCCATGA |
CAAGATCGTG |
ATCGTGCTGA |
|
801 |
AGAACCGCAT |
CTATGTGTAC |
TCCTTCCCCG |
ACAATCCCCG |
AAAGCTGTTT |
GAGTTTGATA |
CCCGGGACAA |
CCCCAAGGGG |
|
881 |
CTCTGTGACC |
TCTGCCCCAG |
CCTGGAGAAG |
CAACTGCTAG |
TGTTCCCGGG |
ACACAAGTGT |
GGGAGTCTGC |
AACTTGTGGA |
|
961 |
CCTGGCGAGC |
ACAAAGCCTG |
GCACCTCGTC |
TGCTCCATTC |
ACGATCAATG |
CACATCAGAG |
TGACATAGCC |
TGTGTGTCTC |
|
1041 |
TAAACCAGCC |
AGGCACTGTA |
GTGGCCTCAG |
CCTCCCAGAA |
GGGTACCCTT |
ATTCGCCTCT |
TTGACACACA |
ATCCAAGGAG |
|
1121 |
AAACTGGTGG |
AGCTGCGCCG |
AGGCACTGAC |
CCTGCCACCC |
TCTACTGCAT |
TAACTTCAGC |
CACGACTCCT |
CCTTCCTCTG |
|
1201 |
CGCTTCCAGT |
GATAAGGGTA |
CTGTCCATAT |
CTTTGCTCTC |
AAGGATACCC |
GCCTCAACCG |
CCGCTCCGCG |
CTGGCTCGCG |
|
1281 |
TGGGCAAGGT |
GGGGCCTATG |
ATTGGGCAGT |
ACGTGGACTC |
TCAGTGGAGC |
CTGGCGAGCT |
TCACTGTGCC |
TGCTGAGTCA |
|
1361 |
GCTTGCATCT |
GCGCCTTCGG |
TCGCAATACT |
TCCAAGAACG |
TCAACTCTGT |
CATTGCCATC |
TGCGTAGATG |
GGACCTTCCA |
|
1441 |
CAAATATGTC |
TTCACTCCTG |
ATGGAAACTG |
CAACAGAGAG |
GCTTTCGACG |
TGTACCTTGA |
CATCTGTGAT |
GATGATGACT |
|
1521 |
TTTAAGGACC |
CTGGGGGCTG |
TGCTAGGGAC |
CTGCAGTGGC |
AGAACTGCAG |
AGCTGAGCCT |
TGGCAGTGGG |
GCGTGCTTGG |
|
1601 |
AAGCCACCAG |
CCAGCAAGCA |
TTAATGGGGC |
TGGTGCCCAC |
TTTCCACTCA |
GCAGAGCTAT |
GTCTAAATAA |
AGAGCTCACT |
|
1681 |
TCCCCCCAGC |
ACTTCTTGAT |
GACTGTGTGC |
CCCAAGGGCC |
AGGCCAGAGA |
CCCAGGAAGG |
CAGCGACCCC |
TTGGGATCCC |
|
1761 |
TAACCTGGAG |
GAAATTGCCA |
GGGACCCAGA |
GGGAGTGCCC |
TAATCCAACC |
TGGGGATTTT |
TTAAAAGCTT |
CCTAGGAAGA |
|
1841 |
GATGATCTCC |
GATGTGATGA |
ATACGAATAA |
AAGGCCCTTA |
ATGGCATTTA |
CGGCTAAAAA |
AAAAAAAAAA |
AAAAAAAAAA |
|
1921 |
AAAAA |
|
|
|
|
|
|
|
|
|
|
|
|
>gi|71483644|ref|NM_007075.3|WD repeat domain 45 (WDR45), transcript variant 1
GGCTCCCACACCACTGCCTCGTGTGGGGTTGTTCGCCCGTGAAGGGGCAGGACAGGGTGCGCGCTGGTGGAGGTTGAAAT
TGTTACATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACGAGGT
CAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATCAGCCGGGCGTGGT
GACGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGGATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGA
GCCGAGATCGCGCCAGTGCACTCCAGCCTGGGCGACAGAGCGAAACTACGTCTCAAAAAAAAAAAAAAAGAAAGAAAAGA
AATTGTTACATTTTATATATATAGGAACAATCCTGCACCATGACTCAACAGCCACTTCGAGGAGTGACCAGCCTGCGTTT
CAACCAAGACCAAAGCTGCTTTTGCTGCGCCATGGAGACAGGTGTGCGCATCTACAACGTGGAGCCCTTGATGGAGAAGG
GGCATCTGGACCACGAGCAGGTGGGCAGCATGGGCTTGGTGGAGATGCTGCACCGCTCCAACCTTCTGGCCTTGGTGGGC
GGTGGTAGTAGTCCCAAGTTCTCAGAGATCTCAGCAGTGCTGATCTGGGACGATGCCCGGGAGGGCAAGGACTCCAAGGA
GAAGCTGGTGCTGGAGTTCACCTTCACCAAGCCAGTGCTTTCTGTGCGCATGCGCCATGACAAGATCGTGATCGTGCTGA
AGAACCGCATCTATGTGTACTCCTTCCCCGACAATCCCCGAAAGCTGTTTGAGTTTGATACCCGGGACAACCCCAAGGGG
CTCTGTGACCTCTGCCCCAGCCTGGAGAAGCAACTGCTAGTGTTCCCGGGACACAAGTGTGGGAGTCTGCAACTTGTGGA
CCTGGCGAGCACAAAGCCTGGCACCTCGTCTGCTCCATTCACGATCAATGCACATCAGAGTGACATAGCCTGTGTGTCTC
TAAACCAGCCAGGCACTGTAGTGGCCTCAGCCTCCCAGAAGGGTACCCTTATTCGCCTCTTTGACACACAATCCAAGGAG
AAACTGGTGGAGCTGCGCCGAGGCACTGACCCTGCCACCCTCTACTGCATTAACTTCAGCCACGACTCCTCCTTCCTCTG
CGCTTCCAGTGATAAGGGTACTGTCCATATCTTTGCTCTCAAGGATACCCGCCTCAACCGCCGCTCCGCGCTGGCTCGCG
TGGGCAAGGTGGGGCCTATGATTGGGCAGTACGTGGACTCTCAGTGGAGCCTGGCGAGCTTCACTGTGCCTGCTGAGTCA
GCTTGCATCTGCGCCTTCGGTCGCAATACTTCCAAGAACGTCAACTCTGTCATTGCCATCTGCGTAGATGGGACCTTCCA
CAAATATGTCTTCACTCCTGATGGAAACTGCAACAGAGAGGCTTTCGACGTGTACCTTGACATCTGTGATGATGATGACT
TTTAAGGACCCTGGGGGCTGTGCTAGGGACCTGCAGTGGCAGAACTGCAGAGCTGAGCCTTGGCAGTGGGGCGTGCTTGG
AAGCCACCAGCCAGCAAGCATTAATGGGGCTGGTGCCCACTTTCCACTCAGCAGAGCTATGTCTAAATAAAGAGCTCACT
TCCCCCCAGCACTTCTTGATGACTGTGTGCCCCAAGGGCCAGGCCAGAGACCCAGGAAGGCAGCGACCCCTTGGGATCCC
TAACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTTTAAAAGCTTCCTAGGAAGA
GATGATCTCCGATGTGATGAATACGAATAAAAGGCCCTTAATGGCATTTACGGCTAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
|
|
|
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Primary source |
RefSeq : NM_001029896.1 (GI:71483645)
|
Name |
WD repeat domain 45 (WDR45), transcript variant 2
|
Type of transcript |
mRNA
|
Organism |
Homo sapiens
|
Length |
1655 nt
|
Map |
Xp11.23
|
Location |
Chromosome X (NC_000023.10) strand : -
48932091...48932570 | 48932794...48932939 | 48933022...48933123 | 48933203...48933411 |
48933524...48933603 | 48934088...48934182 | 48934303...48934408 | 48935301...48935405 |
48935495...48935569 | 48935699...48935770 | 48937409...48937563 |
|
|
|
|
|
|
|
|
|
|
|
|
|
Exon(s) |
Start |
End |
Length |
is coding |
Exon 3
|
1
|
155
|
155
|
1
|
Exon 4
|
156
|
227
|
72
|
1
|
Exon 5
|
228
|
302
|
75
|
1
|
Exon 6
|
303
|
407
|
105
|
1
|
Exon 7b
|
408
|
513
|
106
|
1
|
Exon 8
|
514
|
608
|
95
|
1
|
Exon 9
|
609
|
688
|
80
|
1
|
Exon 10
|
689
|
897
|
209
|
1
|
Exon 11
|
898
|
999
|
102
|
1
|
Exon 12
|
1000
|
1145
|
146
|
1
|
Exon 13
|
1146
|
1625
|
480
|
1
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Primary source |
NCBI : CCDS35250
|
Nucleotide |
WDR45, mRNA isoform 2[NM_001029896.1] : 173...1255
|
Length |
1083
|
Location |
Chromosome X (NC_000023.10) strand : -
48932461...48932570 | 48932794...48932939 | 48933022...48933123 | 48933203...48933411 |
48933524...48933603 | 48934088...48934182 | 48934303...48934408 | 48935301...48935405 |
48935495...48935569 | 48935699...48935753 |
|
Start codon |
1
|
Translation |
NP_001025067.1 |
|
|
|
|
|
|
|
|
|
|
|
|
1 |
GGAAGTAGGG |
CCTGATGTAA |
ACACCCGAGC |
CGGGCTCCAA |
GGCCCGGGAG |
GTCAGAAAAC |
CGGGCCGCGG |
GCGGCACCGA |
|
81 |
CAGCTGGGGC |
CCGGGTCAGG |
GACACGCGGA |
GGTCAGGCCG |
GTGAAGGCGG |
CAGGAAGCTG |
GAGCACGATC |
CCAGGAGGAA |
|
161 |
CAATCCTGCA |
CCATGACTCA |
ACAGCCACTT |
CGAGGAGTGA |
CCAGCCTGCG |
TTTCAACCAA |
GACCAAAGCT |
GCTTTTGCTG |
|
241 |
CGCCATGGAG |
ACAGGTGTGC |
GCATCTACAA |
CGTGGAGCCC |
TTGATGGAGA |
AGGGGCATCT |
GGACCACGAG |
CAGGTGGGCA |
|
321 |
GCATGGGCTT |
GGTGGAGATG |
CTGCACCGCT |
CCAACCTTCT |
GGCCTTGGTG |
GGCGGTGGTA |
GTAGTCCCAA |
GTTCTCAGAG |
|
401 |
ATCTCAGTGC |
TGATCTGGGA |
CGATGCCCGG |
GAGGGCAAGG |
ACTCCAAGGA |
GAAGCTGGTG |
CTGGAGTTCA |
CCTTCACCAA |
|
481 |
GCCAGTGCTT |
TCTGTGCGCA |
TGCGCCATGA |
CAAGATCGTG |
ATCGTGCTGA |
AGAACCGCAT |
CTATGTGTAC |
TCCTTCCCCG |
|
561 |
ACAATCCCCG |
AAAGCTGTTT |
GAGTTTGATA |
CCCGGGACAA |
CCCCAAGGGG |
CTCTGTGACC |
TCTGCCCCAG |
CCTGGAGAAG |
|
641 |
CAACTGCTAG |
TGTTCCCGGG |
ACACAAGTGT |
GGGAGTCTGC |
AACTTGTGGA |
CCTGGCGAGC |
ACAAAGCCTG |
GCACCTCGTC |
|
721 |
TGCTCCATTC |
ACGATCAATG |
CACATCAGAG |
TGACATAGCC |
TGTGTGTCTC |
TAAACCAGCC |
AGGCACTGTA |
GTGGCCTCAG |
|
801 |
CCTCCCAGAA |
GGGTACCCTT |
ATTCGCCTCT |
TTGACACACA |
ATCCAAGGAG |
AAACTGGTGG |
AGCTGCGCCG |
AGGCACTGAC |
|
881 |
CCTGCCACCC |
TCTACTGCAT |
TAACTTCAGC |
CACGACTCCT |
CCTTCCTCTG |
CGCTTCCAGT |
GATAAGGGTA |
CTGTCCATAT |
|
961 |
CTTTGCTCTC |
AAGGATACCC |
GCCTCAACCG |
CCGCTCCGCG |
CTGGCTCGCG |
TGGGCAAGGT |
GGGGCCTATG |
ATTGGGCAGT |
|
1041 |
ACGTGGACTC |
TCAGTGGAGC |
CTGGCGAGCT |
TCACTGTGCC |
TGCTGAGTCA |
GCTTGCATCT |
GCGCCTTCGG |
TCGCAATACT |
|
1121 |
TCCAAGAACG |
TCAACTCTGT |
CATTGCCATC |
TGCGTAGATG |
GGACCTTCCA |
CAAATATGTC |
TTCACTCCTG |
ATGGAAACTG |
|
1201 |
CAACAGAGAG |
GCTTTCGACG |
TGTACCTTGA |
CATCTGTGAT |
GATGATGACT |
TTTAAGGACC |
CTGGGGGCTG |
TGCTAGGGAC |
|
1281 |
CTGCAGTGGC |
AGAACTGCAG |
AGCTGAGCCT |
TGGCAGTGGG |
GCGTGCTTGG |
AAGCCACCAG |
CCAGCAAGCA |
TTAATGGGGC |
|
1361 |
TGGTGCCCAC |
TTTCCACTCA |
GCAGAGCTAT |
GTCTAAATAA |
AGAGCTCACT |
TCCCCCCAGC |
ACTTCTTGAT |
GACTGTGTGC |
|
1441 |
CCCAAGGGCC |
AGGCCAGAGA |
CCCAGGAAGG |
CAGCGACCCC |
TTGGGATCCC |
TAACCTGGAG |
GAAATTGCCA |
GGGACCCAGA |
|
1521 |
GGGAGTGCCC |
TAATCCAACC |
TGGGGATTTT |
TTAAAAGCTT |
CCTAGGAAGA |
GATGATCTCC |
GATGTGATGA |
ATACGAATAA |
|
1601 |
AAGGCCCTTA |
ATGGCATTTA |
CGGCTAAAAA |
AAAAAAAAAA |
AAAAAAAAAA |
AAAAA |
|
|
|
|
|
|
|
|
|
|
|
|
>gi|71483645|ref|NM_001029896.1|WD repeat domain 45 (WDR45), transcript variant 2
GGAAGTAGGGCCTGATGTAAACACCCGAGCCGGGCTCCAAGGCCCGGGAGGTCAGAAAACCGGGCCGCGGGCGGCACCGA
CAGCTGGGGCCCGGGTCAGGGACACGCGGAGGTCAGGCCGGTGAAGGCGGCAGGAAGCTGGAGCACGATCCCAGGAGGAA
CAATCCTGCACCATGACTCAACAGCCACTTCGAGGAGTGACCAGCCTGCGTTTCAACCAAGACCAAAGCTGCTTTTGCTG
CGCCATGGAGACAGGTGTGCGCATCTACAACGTGGAGCCCTTGATGGAGAAGGGGCATCTGGACCACGAGCAGGTGGGCA
GCATGGGCTTGGTGGAGATGCTGCACCGCTCCAACCTTCTGGCCTTGGTGGGCGGTGGTAGTAGTCCCAAGTTCTCAGAG
ATCTCAGTGCTGATCTGGGACGATGCCCGGGAGGGCAAGGACTCCAAGGAGAAGCTGGTGCTGGAGTTCACCTTCACCAA
GCCAGTGCTTTCTGTGCGCATGCGCCATGACAAGATCGTGATCGTGCTGAAGAACCGCATCTATGTGTACTCCTTCCCCG
ACAATCCCCGAAAGCTGTTTGAGTTTGATACCCGGGACAACCCCAAGGGGCTCTGTGACCTCTGCCCCAGCCTGGAGAAG
CAACTGCTAGTGTTCCCGGGACACAAGTGTGGGAGTCTGCAACTTGTGGACCTGGCGAGCACAAAGCCTGGCACCTCGTC
TGCTCCATTCACGATCAATGCACATCAGAGTGACATAGCCTGTGTGTCTCTAAACCAGCCAGGCACTGTAGTGGCCTCAG
CCTCCCAGAAGGGTACCCTTATTCGCCTCTTTGACACACAATCCAAGGAGAAACTGGTGGAGCTGCGCCGAGGCACTGAC
CCTGCCACCCTCTACTGCATTAACTTCAGCCACGACTCCTCCTTCCTCTGCGCTTCCAGTGATAAGGGTACTGTCCATAT
CTTTGCTCTCAAGGATACCCGCCTCAACCGCCGCTCCGCGCTGGCTCGCGTGGGCAAGGTGGGGCCTATGATTGGGCAGT
ACGTGGACTCTCAGTGGAGCCTGGCGAGCTTCACTGTGCCTGCTGAGTCAGCTTGCATCTGCGCCTTCGGTCGCAATACT
TCCAAGAACGTCAACTCTGTCATTGCCATCTGCGTAGATGGGACCTTCCACAAATATGTCTTCACTCCTGATGGAAACTG
CAACAGAGAGGCTTTCGACGTGTACCTTGACATCTGTGATGATGATGACTTTTAAGGACCCTGGGGGCTGTGCTAGGGAC
CTGCAGTGGCAGAACTGCAGAGCTGAGCCTTGGCAGTGGGGCGTGCTTGGAAGCCACCAGCCAGCAAGCATTAATGGGGC
TGGTGCCCACTTTCCACTCAGCAGAGCTATGTCTAAATAAAGAGCTCACTTCCCCCCAGCACTTCTTGATGACTGTGTGC
CCCAAGGGCCAGGCCAGAGACCCAGGAAGGCAGCGACCCCTTGGGATCCCTAACCTGGAGGAAATTGCCAGGGACCCAGA
GGGAGTGCCCTAATCCAACCTGGGGATTTTTTAAAAGCTTCCTAGGAAGAGATGATCTCCGATGTGATGAATACGAATAA
AAGGCCCTTAATGGCATTTACGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
|
|
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Exon number |
2
|
Length |
350 nt
|
Location |
Chromosome X (NC_000023.10) : 48957142...48957491 (-)
|
Is part of |
WDR45, mRNA isoform 1
(NM_007075.3)
|
Sequence |
Show
|
|
GTTGAAATTGTTACATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGAT
CACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATCAGCCG
GGCGTGGTGACGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGGATGGCGTGAACCCGGGAGGCGGAGCT
TGCAGTGAGCCGAGATCGCGCCAGTGCACTCCAGCCTGGGCGACAGAGCGAAACTACGTCTCAAAAAAAAAAAAAAAGAA
AGAAAAGAAATTGTTACATTTTATATATAT
|
|
|
|
|
|
|
|
|
|
|
|
|
Exon number |
3
|
Length |
155 nt
|
Location |
Chromosome X (NC_000023.10) : 48937409...48937563 (-)
|
Is part of |
WDR45, mRNA isoform 2
(NM_001029896.1)
|
Sequence |
Show
|
|
GGAAGTAGGGCCTGATGTAAACACCCGAGCCGGGCTCCAAGGCCCGGGAGGTCAGAAAACCGGGCCGCGGGCGGCACCGA
CAGCTGGGGCCCGGGTCAGGGACACGCGGAGGTCAGGCCGGTGAAGGCGGCAGGAAGCTGGAGCACGATCCCAGG
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Exon number |
7b
|
Length |
106 nt
|
Location |
Chromosome X (NC_000023.10) : 48934303...48934408 (-)
|
Is part of |
WDR45, mRNA isoform 2
(NM_001029896.1)
|
Sequence |
Show
|
|
TGCTGATCTGGGACGATGCCCGGGAGGGCAAGGACTCCAAGGAGAAGCTGGTGCTGGAGTTCACCTTCACCAAGCCAGTG
CTTTCTGTGCGCATGCGCCATGACAA
|
|
|
|
|
|
|
|
|
|
|
|
|
Exon number |
7a
|
Length |
109 nt
|
Location |
Chromosome X (NC_000023.10) : 48934303...48934411 (-)
|
Is part of |
WDR45, mRNA isoform 1
(NM_007075.3)
|
Sequence |
Show
|
|
CAGTGCTGATCTGGGACGATGCCCGGGAGGGCAAGGACTCCAAGGAGAAGCTGGTGCTGGAGTTCACCTTCACCAAGCCA
GTGCTTTCTGTGCGCATGCGCCATGACAA
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Exon number |
13
|
Length |
480 nt
|
Location |
Chromosome X (NC_000023.10) : 48932091...48932570 (-)
|
Is part of |
WDR45, mRNA isoform 2
(NM_001029896.1)
WDR45, mRNA isoform 1
(NM_007075.3)
|
Sequence |
Show
|
|
CCATCTGCGTAGATGGGACCTTCCACAAATATGTCTTCACTCCTGATGGAAACTGCAACAGAGAGGCTTTCGACGTGTAC
CTTGACATCTGTGATGATGATGACTTTTAAGGACCCTGGGGGCTGTGCTAGGGACCTGCAGTGGCAGAACTGCAGAGCTG
AGCCTTGGCAGTGGGGCGTGCTTGGAAGCCACCAGCCAGCAAGCATTAATGGGGCTGGTGCCCACTTTCCACTCAGCAGA
GCTATGTCTAAATAAAGAGCTCACTTCCCCCCAGCACTTCTTGATGACTGTGTGCCCCAAGGGCCAGGCCAGAGACCCAG
GAAGGCAGCGACCCCTTGGGATCCCTAACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG
ATTTTTTAAAAGCTTCCTAGGAAGAGATGATCTCCGATGTGATGAATACGAATAAAAGGCCCTTAATGGCATTTACGGCT
|
|
|
|
|
|
|
|
|
|
|
|
|
Primary source |
Uniprot : Q9Y484
|
Name |
WD repeat domain phosphoinositide-interacting protein 4
|
Alternative name(s) |
WD repeat-containing protein 45
|
Synonym(s) |
WIPI-4
|
Organism |
Homo sapiens
|
Length |
360 aa
|
Protein existence |
---
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
General annotation (Comments)
|
top
|
|
|
|
|
|
|
Similarity
|
Contains 3 WD repeats.
|
Tissue specificity
|
Ubiquitously expressed, with high expression in skeletal muscle and heart. Weakly expressed in liver and placenta. Expression is down-regulated in pancreatic and in kidney tumors.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
With
|
Uniprot accession
|
IntAct
|
|
|
|
|
|
|
|
Alternative product(s)
|
top
|
|
|
|
|
|
|
  |
Uniprot Identifier
|
Difference(s) with the 'canonical' sequence
|
Notes
|
Sequences
|
Isoform 1
|
Q9Y484-1
|
---
|
'Canonical' sequence
|
Get Fasta
|
Isoform 2
|
Q9Y484-2
|
145-145 : K -> KAAHPTPHLHTL
|
---
|
Get Fasta
|
Isoform 3
|
Q9Y484-3
|
78-78 : S -> SA
|
---
|
Get Fasta
|
|
|
|
|
|
|
|
|
|
|
|
|
Feature key |
Position
|
Length
|
Description
|
Feature identifier
|
Region |
|
|
|
|
Repeat region
|
4 - 42
|
39
|
WD 1
|
Q9Y484-REPEAT-WD_1
|
Repeat region
|
190 - 230
|
41
|
WD 2
|
Q9Y484-REPEAT-WD_2
|
Repeat region
|
235 - 274
|
40
|
WD 3
|
Q9Y484-REPEAT-WD_3
|
Natural variations |
|
|
|
|
Alternative sequence
|
78 - 78
|
1
|
S -> SA
|
VSP_016975
|
Alternative sequence
|
145 - 145
|
1
|
K -> KAAHPTPHLHTL
|
VSP_016976
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
MTQQPLRGVT |
SLRFNQDQSC |
FCCAMETGVR |
IYNVEPLMEK |
GHLDHEQVGS |
MGLVEMLHRS |
NLLALVGGGS |
SPKFSEISVL |
|
81 |
IWDDAREGKD |
SKEKLVLEFT |
FTKPVLSVRM |
RHDKIVIVLK |
NRIYVYSFPD |
NPRKLFEFDT |
RDNPKGLCDL |
CPSLEKQLLV |
|
161 |
FPGHKCGSLQ |
LVDLASTKPG |
TSSAPFTINA |
HQSDIACVSL |
NQPGTVVASA |
SQKGTLIRLF |
DTQSKEKLVE |
LRRGTDPATL |
|
241 |
YCINFSHDSS |
FLCASSDKGT |
VHIFALKDTR |
LNRRSALARV |
GKVGPMIGQY |
VDSQWSLASF |
TVPAESACIC |
AFGRNTSKNV |
|
321 |
NSVIAICVDG |
TFHKYVFTPD |
GNCNREAFDV |
YLDICDDDDF |
|
|
|
|
|
|
|
|
|
|
|
|
>sp|Q9Y484|WIPI4_human WD repeat domain phosphoinositide-interacting protein 4
MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRSNLLALVGGGSSPKFSEISVL
IWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLKNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLV
FPGHKCGSLQLVDLASTKPGTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPATL
YCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQWSLASFTVPAESACICAFGRNTSKNV
NSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
|
|
|
| |
|
|
|
|
|
|