BNIP1, mRNA isoform BNIP1 - Generality top
	Primary source RefSeq : NM_001205.2 (GI:153946400) Name BCL2/adenovirus E1B 19kDa interacting protein 1 (BNIP1), transcript variant BNIP1 Type of transcript mRNA Organism Homo sapiens Length 1259 nt Map 5q33-q34 Location Chromosome 5 (NC_000005.9)  strand : + 172571444...172571631   172573868...172573960   172581324...172581415   172585746...172585847   172586935...172587053   172590727...172591389
	Exon(s) top
	Exon(s) Start End Length is coding Exon 1 1 188 188 1 Exon 2 189 281 93 1 Exon 4 282 373 92 1 Exon 5 374 475 102 1 Exon 6 476 594 119 1 Exon 7 595 1257 663 1
	Variation(s) top
	ID Class Location Mutation Length is synonymous Source
	CDS top
	Primary source NCBI : CCDS4384 Nucleotide BNIP1, mRNA isoform BNIP1[NM_001205.2] : 105...791 Length 687 Location Chromosome 5 (NC_000005.9)  strand : + 172571548...172571631   172573868...172573960   172581324...172581415   172585746...172585847   172586935...172587053   172590727...172590923   Start codon 1 Translation NP_001196.2
	Sequence top
	FASTA 1  CTCTAGGGGG CGCTGCCCCG AGACTGGGTG GGGAGGGAAA GAAGGTGGTG CGAAAACGCG TTTGAACTTG GGTCCTGCCG 81  CTGCCCGTAG CCGGCGTCCC CAACATGGCG GCTCCCCAAG ACGTCCACGT CCGGATCTGT AACCAAGAGA TTGTCAAATT 161  TGACCTGGAG GTGAAGGCGC TTATTCAGGA TATCCGTGAT TGTTCAGGAC CCTTAAGTGC TCTTACTGAA CTGAATACTA 241  AAGTAAAAGA GAAATTTCAA CAGTTGCGTC ACAGAATACA GGACCTGGAG CAGTTGGCTA AAGAGCAAGA CAAAGAATCA 321  GAGAAACAAC TTCTACTCCA GGAAGTGGAG AATCACAAAA AGCAGATGCT CAGCAATCAG GCCTCATGGA GGAAAGCTAA 401  TCTCACCTGC AAAATTGCAA TCGACAATCT AGAGAAAGCA GAACTTCTTC AGGGAGGAGA TCTCTTAAGG CAAAGGAAAA 481  CCACCAAAGA GAGCCTGGCC CAGACATCCA GTACCATCAC TGAGAGCCTC ATGGGGATCA GCAGGATGAT GGCCCAGCAG 561  GTCCAGCAGA GCGAGGAGGC CATGCAGTCT CTAGTCACTT CTTCACGAAC GATCCTGGAT GCAAATGAAG AATTTAAGTC 641  CATGTCGGGC ACCATCCAGC TGGGCCGGAA GCTTATCACA AAATACAATC GCCGGGAGCT GACGGACAAG CTTCTCATCT 721  TCCTTGCGCT AGCCCTGTTT CTTGCTACGG TCCTCTATAT TGTGAAAAAG CGGCTCTTTC CATTTTTGTG AGATCCCAAA 801  GGTGCCAGTT CTGGCCCTTT CAGCTCCTGT TTCAGGATCT GTCCTGGTTC CTGAGCTCTA GGCTGCTAAG CTGAGCCACA 881  CACCCCTCCG TTTGCACCAG TTGCCTGCAG GTTGGATGGA ACACAGTGCC CCACTTTTCT GCAAGTAGCT GGCTTGTAAA 961  GGGTGAACAG AGCCATGGGA GGAAGGTCTG GCATTGGGAT GCCGCCCTGG GGACATACGA ACCGCCTCCT TCCACCATTG 1041  TGCACTATGG GAGGCCGCTG CTGCGTGGAG CACTTAAAGT CCAGCCTCCA GGACCGGATG CCCCTCCTGT CTCCCGCTCC 1121  CATCGTGCCC TTAAATGCCA GATCTGGTGG AGGGAAGAGA GAAGAGGTAG GAAGAAAGGT GATGAAAACT CCTGGTCATT 1201  CCTTGAATAA ACTTGATTTT ATTTAATAGA ATAAAATGTA TTTGATTTTG TAAGATAAA >gi|153946400|ref|NM_001205.2|BCL2/adenovirus E1B 19kDa interacting protein 1 (BNIP1), transcript variant BNIP1 CTCTAGGGGGCGCTGCCCCGAGACTGGGTGGGGAGGGAAAGAAGGTGGTGCGAAAACGCGTTTGAACTTGGGTCCTGCCG CTGCCCGTAGCCGGCGTCCCCAACATGGCGGCTCCCCAAGACGTCCACGTCCGGATCTGTAACCAAGAGATTGTCAAATT TGACCTGGAGGTGAAGGCGCTTATTCAGGATATCCGTGATTGTTCAGGACCCTTAAGTGCTCTTACTGAACTGAATACTA AAGTAAAAGAGAAATTTCAACAGTTGCGTCACAGAATACAGGACCTGGAGCAGTTGGCTAAAGAGCAAGACAAAGAATCA GAGAAACAACTTCTACTCCAGGAAGTGGAGAATCACAAAAAGCAGATGCTCAGCAATCAGGCCTCATGGAGGAAAGCTAA TCTCACCTGCAAAATTGCAATCGACAATCTAGAGAAAGCAGAACTTCTTCAGGGAGGAGATCTCTTAAGGCAAAGGAAAA CCACCAAAGAGAGCCTGGCCCAGACATCCAGTACCATCACTGAGAGCCTCATGGGGATCAGCAGGATGATGGCCCAGCAG GTCCAGCAGAGCGAGGAGGCCATGCAGTCTCTAGTCACTTCTTCACGAACGATCCTGGATGCAAATGAAGAATTTAAGTC CATGTCGGGCACCATCCAGCTGGGCCGGAAGCTTATCACAAAATACAATCGCCGGGAGCTGACGGACAAGCTTCTCATCT TCCTTGCGCTAGCCCTGTTTCTTGCTACGGTCCTCTATATTGTGAAAAAGCGGCTCTTTCCATTTTTGTGAGATCCCAAA GGTGCCAGTTCTGGCCCTTTCAGCTCCTGTTTCAGGATCTGTCCTGGTTCCTGAGCTCTAGGCTGCTAAGCTGAGCCACA CACCCCTCCGTTTGCACCAGTTGCCTGCAGGTTGGATGGAACACAGTGCCCCACTTTTCTGCAAGTAGCTGGCTTGTAAA GGGTGAACAGAGCCATGGGAGGAAGGTCTGGCATTGGGATGCCGCCCTGGGGACATACGAACCGCCTCCTTCCACCATTG TGCACTATGGGAGGCCGCTGCTGCGTGGAGCACTTAAAGTCCAGCCTCCAGGACCGGATGCCCCTCCTGTCTCCCGCTCC CATCGTGCCCTTAAATGCCAGATCTGGTGGAGGGAAGAGAGAAGAGGTAGGAAGAAAGGTGATGAAAACTCCTGGTCATT CCTTGAATAAACTTGATTTTATTTAATAGAATAAAATGTATTTGATTTTGTAAGATAAA

	BNIP1, mRNA isoform BNIP1-a - Generality top
	Primary source RefSeq : NM_013978.2 (GI:153946402) Name BCL2/adenovirus E1B 19kDa interacting protein 1 (BNIP1), transcript variant BNIP1-a Type of transcript mRNA Organism Homo sapiens Length 1157 nt Map 5q33-q34 Location Chromosome 5 (NC_000005.9)  strand : + 172571444...172571631   172573868...172573960   172581324...172581415   172586935...172587053   172590727...172591389
	Exon(s) top
	Exon(s) Start End Length is coding Exon 1 1 188 188 1 Exon 2 189 281 93 1 Exon 4 282 373 92 1 Exon 6 374 492 119 1 Exon 7 493 1155 663 1
	Variation(s) top
	ID Class Location Mutation Length is synonymous Source
	CDS top
	Primary source NCBI : CCDS43400 Nucleotide BNIP1, mRNA isoform BNIP1-a[NM_013978.2] : 105...689 Length 585 Location Chromosome 5 (NC_000005.9)  strand : + 172571548...172571631   172573868...172573960   172581324...172581415   172586935...172587053   172590727...172590923   Start codon 1 Translation NP_053581.2
	Sequence top
	FASTA 1  CTCTAGGGGG CGCTGCCCCG AGACTGGGTG GGGAGGGAAA GAAGGTGGTG CGAAAACGCG TTTGAACTTG GGTCCTGCCG 81  CTGCCCGTAG CCGGCGTCCC CAACATGGCG GCTCCCCAAG ACGTCCACGT CCGGATCTGT AACCAAGAGA TTGTCAAATT 161  TGACCTGGAG GTGAAGGCGC TTATTCAGGA TATCCGTGAT TGTTCAGGAC CCTTAAGTGC TCTTACTGAA CTGAATACTA 241  AAGTAAAAGA GAAATTTCAA CAGTTGCGTC ACAGAATACA GGACCTGGAG CAGTTGGCTA AAGAGCAAGA CAAAGAATCA 321  GAGAAACAAC TTCTACTCCA GGAAGTGGAG AATCACAAAA AGCAGATGCT CAGGAAAACC ACCAAAGAGA GCCTGGCCCA 401  GACATCCAGT ACCATCACTG AGAGCCTCAT GGGGATCAGC AGGATGATGG CCCAGCAGGT CCAGCAGAGC GAGGAGGCCA 481  TGCAGTCTCT AGTCACTTCT TCACGAACGA TCCTGGATGC AAATGAAGAA TTTAAGTCCA TGTCGGGCAC CATCCAGCTG 561  GGCCGGAAGC TTATCACAAA ATACAATCGC CGGGAGCTGA CGGACAAGCT TCTCATCTTC CTTGCGCTAG CCCTGTTTCT 641  TGCTACGGTC CTCTATATTG TGAAAAAGCG GCTCTTTCCA TTTTTGTGAG ATCCCAAAGG TGCCAGTTCT GGCCCTTTCA 721  GCTCCTGTTT CAGGATCTGT CCTGGTTCCT GAGCTCTAGG CTGCTAAGCT GAGCCACACA CCCCTCCGTT TGCACCAGTT 801  GCCTGCAGGT TGGATGGAAC ACAGTGCCCC ACTTTTCTGC AAGTAGCTGG CTTGTAAAGG GTGAACAGAG CCATGGGAGG 881  AAGGTCTGGC ATTGGGATGC CGCCCTGGGG ACATACGAAC CGCCTCCTTC CACCATTGTG CACTATGGGA GGCCGCTGCT 961  GCGTGGAGCA CTTAAAGTCC AGCCTCCAGG ACCGGATGCC CCTCCTGTCT CCCGCTCCCA TCGTGCCCTT AAATGCCAGA 1041  TCTGGTGGAG GGAAGAGAGA AGAGGTAGGA AGAAAGGTGA TGAAAACTCC TGGTCATTCC TTGAATAAAC TTGATTTTAT 1121  TTAATAGAAT AAAATGTATT TGATTTTGTA AGATAAA >gi|153946402|ref|NM_013978.2|BCL2/adenovirus E1B 19kDa interacting protein 1 (BNIP1), transcript variant BNIP1-a CTCTAGGGGGCGCTGCCCCGAGACTGGGTGGGGAGGGAAAGAAGGTGGTGCGAAAACGCGTTTGAACTTGGGTCCTGCCG CTGCCCGTAGCCGGCGTCCCCAACATGGCGGCTCCCCAAGACGTCCACGTCCGGATCTGTAACCAAGAGATTGTCAAATT TGACCTGGAGGTGAAGGCGCTTATTCAGGATATCCGTGATTGTTCAGGACCCTTAAGTGCTCTTACTGAACTGAATACTA AAGTAAAAGAGAAATTTCAACAGTTGCGTCACAGAATACAGGACCTGGAGCAGTTGGCTAAAGAGCAAGACAAAGAATCA GAGAAACAACTTCTACTCCAGGAAGTGGAGAATCACAAAAAGCAGATGCTCAGGAAAACCACCAAAGAGAGCCTGGCCCA GACATCCAGTACCATCACTGAGAGCCTCATGGGGATCAGCAGGATGATGGCCCAGCAGGTCCAGCAGAGCGAGGAGGCCA TGCAGTCTCTAGTCACTTCTTCACGAACGATCCTGGATGCAAATGAAGAATTTAAGTCCATGTCGGGCACCATCCAGCTG GGCCGGAAGCTTATCACAAAATACAATCGCCGGGAGCTGACGGACAAGCTTCTCATCTTCCTTGCGCTAGCCCTGTTTCT TGCTACGGTCCTCTATATTGTGAAAAAGCGGCTCTTTCCATTTTTGTGAGATCCCAAAGGTGCCAGTTCTGGCCCTTTCA GCTCCTGTTTCAGGATCTGTCCTGGTTCCTGAGCTCTAGGCTGCTAAGCTGAGCCACACACCCCTCCGTTTGCACCAGTT GCCTGCAGGTTGGATGGAACACAGTGCCCCACTTTTCTGCAAGTAGCTGGCTTGTAAAGGGTGAACAGAGCCATGGGAGG AAGGTCTGGCATTGGGATGCCGCCCTGGGGACATACGAACCGCCTCCTTCCACCATTGTGCACTATGGGAGGCCGCTGCT GCGTGGAGCACTTAAAGTCCAGCCTCCAGGACCGGATGCCCCTCCTGTCTCCCGCTCCCATCGTGCCCTTAAATGCCAGA TCTGGTGGAGGGAAGAGAGAAGAGGTAGGAAGAAAGGTGATGAAAACTCCTGGTCATTCCTTGAATAAACTTGATTTTAT TTAATAGAATAAAATGTATTTGATTTTGTAAGATAAA

	BNIP1, mRNA isoform BNIP1-b - Generality top
	Primary source RefSeq : NM_013979.2 (GI:153946398) Name BCL2/adenovirus E1B 19kDa interacting protein 1 (BNIP1), transcript variant BNIP1-b Type of transcript mRNA Organism Homo sapiens Length 1388 nt Map 5q33-q34 Location Chromosome 5 (NC_000005.9)  strand : + 172571444...172571631   172573868...172573960   172578568...172578696   172581324...172581415   172585746...172585847   172586935...172587053   172590727...172591389
	Exon(s) top
	Exon(s) Start End Length is coding Exon 1 1 188 188 1 Exon 2 189 281 93 1 Exon 3 282 410 129 1 Exon 4 411 502 92 1 Exon 5 503 604 102 1 Exon 6 605 723 119 1 Exon 7 724 1386 663 1
	Variation(s) top
	ID Class Location Mutation Length is synonymous Source
	CDS top
	Primary source NCBI : CCDS4385 Nucleotide BNIP1, mRNA isoform BNIP1-b[NM_013979.2] : 105...920 Length 816 Location Chromosome 5 (NC_000005.9)  strand : + 172571548...172571631   172573868...172573960   172578568...172578696   172581324...172581415   172585746...172585847   172586935...172587053   172590727...172590923   Start codon 1 Translation NP_053582.2
	Sequence top
	FASTA 1  CTCTAGGGGG CGCTGCCCCG AGACTGGGTG GGGAGGGAAA GAAGGTGGTG CGAAAACGCG TTTGAACTTG GGTCCTGCCG 81  CTGCCCGTAG CCGGCGTCCC CAACATGGCG GCTCCCCAAG ACGTCCACGT CCGGATCTGT AACCAAGAGA TTGTCAAATT 161  TGACCTGGAG GTGAAGGCGC TTATTCAGGA TATCCGTGAT TGTTCAGGAC CCTTAAGTGC TCTTACTGAA CTGAATACTA 241  AAGTAAAAGA GAAATTTCAA CAGTTGCGTC ACAGAATACA GCCAGTTCTC TATCAAAGGG CATTTATTTG GACTGCTTCC 321  ACATTTTTTT TTAAGCTAAC TTATTCCCTG ACAGACTTTT CTTCAACTCA GCATGACTTC AACTCTCCAA CTACACCTGT 401  TACCTTCAGT GACCTGGAGC AGTTGGCTAA AGAGCAAGAC AAAGAATCAG AGAAACAACT TCTACTCCAG GAAGTGGAGA 481  ATCACAAAAA GCAGATGCTC AGCAATCAGG CCTCATGGAG GAAAGCTAAT CTCACCTGCA AAATTGCAAT CGACAATCTA 561  GAGAAAGCAG AACTTCTTCA GGGAGGAGAT CTCTTAAGGC AAAGGAAAAC CACCAAAGAG AGCCTGGCCC AGACATCCAG 641  TACCATCACT GAGAGCCTCA TGGGGATCAG CAGGATGATG GCCCAGCAGG TCCAGCAGAG CGAGGAGGCC ATGCAGTCTC 721  TAGTCACTTC TTCACGAACG ATCCTGGATG CAAATGAAGA ATTTAAGTCC ATGTCGGGCA CCATCCAGCT GGGCCGGAAG 801  CTTATCACAA AATACAATCG CCGGGAGCTG ACGGACAAGC TTCTCATCTT CCTTGCGCTA GCCCTGTTTC TTGCTACGGT 881  CCTCTATATT GTGAAAAAGC GGCTCTTTCC ATTTTTGTGA GATCCCAAAG GTGCCAGTTC TGGCCCTTTC AGCTCCTGTT 961  TCAGGATCTG TCCTGGTTCC TGAGCTCTAG GCTGCTAAGC TGAGCCACAC ACCCCTCCGT TTGCACCAGT TGCCTGCAGG 1041  TTGGATGGAA CACAGTGCCC CACTTTTCTG CAAGTAGCTG GCTTGTAAAG GGTGAACAGA GCCATGGGAG GAAGGTCTGG 1121  CATTGGGATG CCGCCCTGGG GACATACGAA CCGCCTCCTT CCACCATTGT GCACTATGGG AGGCCGCTGC TGCGTGGAGC 1201  ACTTAAAGTC CAGCCTCCAG GACCGGATGC CCCTCCTGTC TCCCGCTCCC ATCGTGCCCT TAAATGCCAG ATCTGGTGGA 1281  GGGAAGAGAG AAGAGGTAGG AAGAAAGGTG ATGAAAACTC CTGGTCATTC CTTGAATAAA CTTGATTTTA TTTAATAGAA 1361  TAAAATGTAT TTGATTTTGT AAGATAAA >gi|153946398|ref|NM_013979.2|BCL2/adenovirus E1B 19kDa interacting protein 1 (BNIP1), transcript variant BNIP1-b CTCTAGGGGGCGCTGCCCCGAGACTGGGTGGGGAGGGAAAGAAGGTGGTGCGAAAACGCGTTTGAACTTGGGTCCTGCCG CTGCCCGTAGCCGGCGTCCCCAACATGGCGGCTCCCCAAGACGTCCACGTCCGGATCTGTAACCAAGAGATTGTCAAATT TGACCTGGAGGTGAAGGCGCTTATTCAGGATATCCGTGATTGTTCAGGACCCTTAAGTGCTCTTACTGAACTGAATACTA AAGTAAAAGAGAAATTTCAACAGTTGCGTCACAGAATACAGCCAGTTCTCTATCAAAGGGCATTTATTTGGACTGCTTCC ACATTTTTTTTTAAGCTAACTTATTCCCTGACAGACTTTTCTTCAACTCAGCATGACTTCAACTCTCCAACTACACCTGT TACCTTCAGTGACCTGGAGCAGTTGGCTAAAGAGCAAGACAAAGAATCAGAGAAACAACTTCTACTCCAGGAAGTGGAGA ATCACAAAAAGCAGATGCTCAGCAATCAGGCCTCATGGAGGAAAGCTAATCTCACCTGCAAAATTGCAATCGACAATCTA GAGAAAGCAGAACTTCTTCAGGGAGGAGATCTCTTAAGGCAAAGGAAAACCACCAAAGAGAGCCTGGCCCAGACATCCAG TACCATCACTGAGAGCCTCATGGGGATCAGCAGGATGATGGCCCAGCAGGTCCAGCAGAGCGAGGAGGCCATGCAGTCTC TAGTCACTTCTTCACGAACGATCCTGGATGCAAATGAAGAATTTAAGTCCATGTCGGGCACCATCCAGCTGGGCCGGAAG CTTATCACAAAATACAATCGCCGGGAGCTGACGGACAAGCTTCTCATCTTCCTTGCGCTAGCCCTGTTTCTTGCTACGGT CCTCTATATTGTGAAAAAGCGGCTCTTTCCATTTTTGTGAGATCCCAAAGGTGCCAGTTCTGGCCCTTTCAGCTCCTGTT TCAGGATCTGTCCTGGTTCCTGAGCTCTAGGCTGCTAAGCTGAGCCACACACCCCTCCGTTTGCACCAGTTGCCTGCAGG TTGGATGGAACACAGTGCCCCACTTTTCTGCAAGTAGCTGGCTTGTAAAGGGTGAACAGAGCCATGGGAGGAAGGTCTGG CATTGGGATGCCGCCCTGGGGACATACGAACCGCCTCCTTCCACCATTGTGCACTATGGGAGGCCGCTGCTGCGTGGAGC ACTTAAAGTCCAGCCTCCAGGACCGGATGCCCCTCCTGTCTCCCGCTCCCATCGTGCCCTTAAATGCCAGATCTGGTGGA GGGAAGAGAGAAGAGGTAGGAAGAAAGGTGATGAAAACTCCTGGTCATTCCTTGAATAAACTTGATTTTATTTAATAGAA TAAAATGTATTTGATTTTGTAAGATAAA

	BNIP1, mRNA isoform BNIP1-c - Generality top
	Primary source RefSeq : NM_013980.2 (GI:153946404) Name BCL2/adenovirus E1B 19kDa interacting protein 1 (BNIP1), transcript variant BNIP1-c Type of transcript mRNA Organism Homo sapiens Length 1286 nt Map 5q33-q34 Location Chromosome 5 (NC_000005.9)  strand : + 172571444...172571631   172573868...172573960   172578568...172578696   172581324...172581415   172586935...172587053   172590727...172591389
	Exon(s) top
	Exon(s) Start End Length is coding Exon 1 1 188 188 1 Exon 2 189 281 93 1 Exon 3 282 410 129 1 Exon 4 411 502 92 1 Exon 6 503 621 119 1 Exon 7 622 1284 663 1
	Variation(s) top
	ID Class Location Mutation Length is synonymous Source rs5745100 SNP 146 a/c 1 ? dbSNP rs1050217 SNP 455 a/c 1 ? dbSNP rs5745176 SNP 916 c/t 1 ? dbSNP rs8069 SNP 1050 c/t 1 ? dbSNP rs8543 SNP 1231 g/t 1 ? dbSNP rs1050259 SNP 1259 a/t 1 ? dbSNP rs5745177 SNP 1265 a/g 1 ? dbSNP
	CDS top
	Primary source NCBI : CCDS4386 Nucleotide BNIP1, mRNA isoform BNIP1-c[NM_013980.2] : 105...818 Length 714 Location Chromosome 5 (NC_000005.9)  strand : + 172571548...172571631   172573868...172573960   172578568...172578696   172581324...172581415   172586935...172587053   172590727...172590923   Start codon 1 Translation NP_053583.2
	Sequence top
	FASTA 1  CTCTAGGGGG CGCTGCCCCG AGACTGGGTG GGGAGGGAAA GAAGGTGGTG CGAAAACGCG TTTGAACTTG GGTCCTGCCG 81  CTGCCCGTAG CCGGCGTCCC CAACATGGCG GCTCCCCAAG ACGTCCACGT CCGGATCTGT AACCAAGAGA TTGTCAAATT 161  TGACCTGGAG GTGAAGGCGC TTATTCAGGA TATCCGTGAT TGTTCAGGAC CCTTAAGTGC TCTTACTGAA CTGAATACTA 241  AAGTAAAAGA GAAATTTCAA CAGTTGCGTC ACAGAATACA GCCAGTTCTC TATCAAAGGG CATTTATTTG GACTGCTTCC 321  ACATTTTTTT TTAAGCTAAC TTATTCCCTG ACAGACTTTT CTTCAACTCA GCATGACTTC AACTCTCCAA CTACACCTGT 401  TACCTTCAGT GACCTGGAGC AGTTGGCTAA AGAGCAAGAC AAAGAATCAG AGAAACAACT TCTACTCCAG GAAGTGGAGA 481  ATCACAAAAA GCAGATGCTC AGGAAAACCA CCAAAGAGAG CCTGGCCCAG ACATCCAGTA CCATCACTGA GAGCCTCATG 561  GGGATCAGCA GGATGATGGC CCAGCAGGTC CAGCAGAGCG AGGAGGCCAT GCAGTCTCTA GTCACTTCTT CACGAACGAT 641  CCTGGATGCA AATGAAGAAT TTAAGTCCAT GTCGGGCACC ATCCAGCTGG GCCGGAAGCT TATCACAAAA TACAATCGCC 721  GGGAGCTGAC GGACAAGCTT CTCATCTTCC TTGCGCTAGC CCTGTTTCTT GCTACGGTCC TCTATATTGT GAAAAAGCGG 801  CTCTTTCCAT TTTTGTGAGA TCCCAAAGGT GCCAGTTCTG GCCCTTTCAG CTCCTGTTTC AGGATCTGTC CTGGTTCCTG 881  AGCTCTAGGC TGCTAAGCTG AGCCACACAC CCCTCCGTTT GCACCAGTTG CCTGCAGGTT GGATGGAACA CAGTGCCCCA 961  CTTTTCTGCA AGTAGCTGGC TTGTAAAGGG TGAACAGAGC CATGGGAGGA AGGTCTGGCA TTGGGATGCC GCCCTGGGGA 1041  CATACGAACC GCCTCCTTCC ACCATTGTGC ACTATGGGAG GCCGCTGCTG CGTGGAGCAC TTAAAGTCCA GCCTCCAGGA 1121  CCGGATGCCC CTCCTGTCTC CCGCTCCCAT CGTGCCCTTA AATGCCAGAT CTGGTGGAGG GAAGAGAGAA GAGGTAGGAA 1201  GAAAGGTGAT GAAAACTCCT GGTCATTCCT TGAATAAACT TGATTTTATT TAATAGAATA AAATGTATTT GATTTTGTAA 1281  GATAAA >gi|153946404|ref|NM_013980.2|BCL2/adenovirus E1B 19kDa interacting protein 1 (BNIP1), transcript variant BNIP1-c CTCTAGGGGGCGCTGCCCCGAGACTGGGTGGGGAGGGAAAGAAGGTGGTGCGAAAACGCGTTTGAACTTGGGTCCTGCCG CTGCCCGTAGCCGGCGTCCCCAACATGGCGGCTCCCCAAGACGTCCACGTCCGGATCTGTAACCAAGAGATTGTCAAATT TGACCTGGAGGTGAAGGCGCTTATTCAGGATATCCGTGATTGTTCAGGACCCTTAAGTGCTCTTACTGAACTGAATACTA AAGTAAAAGAGAAATTTCAACAGTTGCGTCACAGAATACAGCCAGTTCTCTATCAAAGGGCATTTATTTGGACTGCTTCC ACATTTTTTTTTAAGCTAACTTATTCCCTGACAGACTTTTCTTCAACTCAGCATGACTTCAACTCTCCAACTACACCTGT TACCTTCAGTGACCTGGAGCAGTTGGCTAAAGAGCAAGACAAAGAATCAGAGAAACAACTTCTACTCCAGGAAGTGGAGA ATCACAAAAAGCAGATGCTCAGGAAAACCACCAAAGAGAGCCTGGCCCAGACATCCAGTACCATCACTGAGAGCCTCATG GGGATCAGCAGGATGATGGCCCAGCAGGTCCAGCAGAGCGAGGAGGCCATGCAGTCTCTAGTCACTTCTTCACGAACGAT CCTGGATGCAAATGAAGAATTTAAGTCCATGTCGGGCACCATCCAGCTGGGCCGGAAGCTTATCACAAAATACAATCGCC GGGAGCTGACGGACAAGCTTCTCATCTTCCTTGCGCTAGCCCTGTTTCTTGCTACGGTCCTCTATATTGTGAAAAAGCGG CTCTTTCCATTTTTGTGAGATCCCAAAGGTGCCAGTTCTGGCCCTTTCAGCTCCTGTTTCAGGATCTGTCCTGGTTCCTG AGCTCTAGGCTGCTAAGCTGAGCCACACACCCCTCCGTTTGCACCAGTTGCCTGCAGGTTGGATGGAACACAGTGCCCCA CTTTTCTGCAAGTAGCTGGCTTGTAAAGGGTGAACAGAGCCATGGGAGGAAGGTCTGGCATTGGGATGCCGCCCTGGGGA CATACGAACCGCCTCCTTCCACCATTGTGCACTATGGGAGGCCGCTGCTGCGTGGAGCACTTAAAGTCCAGCCTCCAGGA CCGGATGCCCCTCCTGTCTCCCGCTCCCATCGTGCCCTTAAATGCCAGATCTGGTGGAGGGAAGAGAGAAGAGGTAGGAA GAAAGGTGATGAAAACTCCTGGTCATTCCTTGAATAAACTTGATTTTATTTAATAGAATAAAATGTATTTGATTTTGTAA GATAAA

	Q12981 - Generality top
	Primary source Uniprot : Q12981 Name Vesicle transport protein SEC20 Alternative name(s) BCL2/adenovirus E1B 19 kDa protein-interacting protein 1 Transformation-related gene 8 protein Synonym(s) TRG-8 Organism Homo sapiens Length 228 aa Protein existence ---
	External Links top
	ArrayExpress Q12981   Refseq NP_053583.2   NP_053582.2   NP_053581.2   NP_001196.2   Uniprot Q12981   InterPro IPR005606   KEGG hsa:662   Pfam PF03908
	General annotation (Comments) top
	Function SNARE that may be involved in targeting and fusion of Golgi-derived retrograde transport vesicles with the ER. Required for maintenance of ER network. Implicated in the suppression of cell death. Similarity Belongs to the SEC20 family. Subcellular location Endoplasmic reticulum membrane; Single-pass type IV membrane protein. Subunit Component of a SNARE complex consisting of STX18, USE1L, BNIP1/SEC20L and SEC22B. Interacts directly with STX18, RINT1/TIP20L and NAPA. Interacts with ZW10 through RINT1. Interacts with BCL2 and adenovirus E1B 19 kDa protein. Tissue specificity Isoform 1 is highly expressed in heart, brain, liver skeletal muscle and pancreas. Isoform 3 is moderately expressed in placenta, lung and kidney. Isoform 4 is highly expressed in testis and small intestine.
	Ontologies top
	Biological process apoptosis [GO:0006915] anti-apoptosis [GO:0006916] induction of apoptosis [GO:0006917] endoplasmic reticulum organization [GO:0007029] vesicle-mediated transport [GO:0016192] endoplasmic reticulum membrane fusion [GO:0016320] Cellular component nuclear envelope [GO:0005635] integral to endoplasmic reticulum membrane [GO:0030176] SNARE complex [GO:0031201] Molecular function protein binding [GO:0005515]
	Binary interactions top
	With Uniprot accession IntAct
	Alternative product(s) top
	Uniprot Identifier Difference(s) with the 'canonical' sequence Notes Sequences Isoform 3 Q12981-1 59-59  :  Q -> QPVLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNS PTTPVTFS --- Get Fasta Isoform 2 Q12981-2 90-123  :  Missing --- Get Fasta Isoform 4 Q12981-3 59-59  :  Q -> QPVLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNS PTTPVTFS 90-123  :  Missing --- Get Fasta Isoform 1 Q12981-4 --- 'Canonical' sequence Get Fasta
	Sequence annotation top
	Feature key Position Length Description Feature identifier Region           Coiled coil 37 - 90 54 Potential Q12981-COILED-37 Topological domain 1 - 199 199 Cytoplasmic (Potential) Q12981-TOPO_DOM-1 Topological domain 221 - 228 8 Lumenal (Potential) Q12981-TOPO_DOM-221 Transmembrane 200 - 220 21 Helical; Anchor for type IV membrane protein; (Potential) Q12981-TRANSMEM-200 Natural variations           Natural variant site 14 - 14 1 Q -> H (in dbSNP:rs5745100) VAR_019169 Alternative sequence 59 - 59 1 Q -> QPVLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNS PTTPVTFS VSP_017901 Alternative sequence 90 - 123 34 Missing VSP_004330 Experimental info           Mutagenesis 114 - 114 1 L->A: Loss of proapoptotic effect. No effect on interaction with RINT1 Q12981-MUTAGEN-114
	Sequence top
	FASTA 1  MAAPQDVHVR ICNQEIVKFD LEVKALIQDI RDCSGPLSAL TELNTKVKEK FQQLRHRIQD LEQLAKEQDK ESEKQLLLQE 81  VENHKKQMLS NQASWRKANL TCKIAIDNLE KAELLQGGDL LRQRKTTKES LAQTSSTITE SLMGISRMMA QQVQQSEEAM 161  QSLVTSSRTI LDANEEFKSM SGTIQLGRKL ITKYNRRELT DKLLIFLALA LFLATVLYIV KKRLFPFL >sp|Q12981|SEC20_human Vesicle transport protein SEC20 MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQDLEQLAKEQDKESEKQLLLQE VENHKKQMLSNQASWRKANLTCKIAIDNLEKAELLQGGDLLRQRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAM QSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL

	D3DQM5 - Generality top
	Primary source Uniprot : D3DQM5 Name BCL2/adenovirus E1B 19kDa interacting protein 1, isoform CRA_e [submitted name] Alternative name(s) Synonym(s) Organism Homo sapiens Length 228 aa Protein existence ---
	External Links top
	Refseq NP_001196.2   Uniprot D3DQM5   InterPro IPR005606   Pfam PF03908
	General annotation (Comments) top
	Ontologies top
	Binary interactions top
	With Uniprot accession IntAct
	Alternative product(s) top
	Sequence annotation top
	Feature key Position Length Description Feature identifier
	Sequence top
	FASTA 1  MAAPQDVHVR ICNQEIVKFD LEVKALIQDI RDCSGPLSAL TELNTKVKEK FQQLRHRIQD LEQLAKEQDK ESEKQLLLQE 81  VENHKKQMLS NQASWRKANL TCKIAIDNLE KAELLQGGDL LRQRKTTKES LAQTSSTITE SLMGISRMMA QQVQQSEEAM 161  QSLVTSSRTI LDANEEFKSM SGTIQLGRKL ITKYNRRELT DKLLIFLALA LFLATVLYIV KKRLFPFL >sp|D3DQM5|D3DQM5_human BCL2/adenovirus E1B 19kDa interacting protein 1, isoform CRA_e [submitted name] MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQDLEQLAKEQDKESEKQLLLQE VENHKKQMLSNQASWRKANLTCKIAIDNLEKAELLQGGDLLRQRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAM QSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL

	D3DQM3 - Generality top
	Primary source Uniprot : D3DQM3 Name BCL2/adenovirus E1B 19kDa interacting protein 1, isoform CRA_d [submitted name] Alternative name(s) Synonym(s) Organism Homo sapiens Length 271 aa Protein existence ---
	External Links top
	Refseq NP_053582.2   Uniprot D3DQM3   InterPro IPR005606   Pfam PF03908
	General annotation (Comments) top
	Ontologies top
	Binary interactions top
	With Uniprot accession IntAct
	Alternative product(s) top
	Sequence annotation top
	Feature key Position Length Description Feature identifier
	Sequence top
	FASTA 1  MAAPQDVHVR ICNQEIVKFD LEVKALIQDI RDCSGPLSAL TELNTKVKEK FQQLRHRIQP VLYQRAFIWT ASTFFFKLTY 81  SLTDFSSTQH DFNSPTTPVT FSDLEQLAKE QDKESEKQLL LQEVENHKKQ MLSNQASWRK ANLTCKIAID NLEKAELLQG 161  GDLLRQRKTT KESLAQTSST ITESLMGISR MMAQQVQQSE EAMQSLVTSS RTILDANEEF KSMSGTIQLG RKLITKYNRR 241  ELTDKLLIFL ALALFLATVL YIVKKRLFPF L >sp|D3DQM3|D3DQM3_human BCL2/adenovirus E1B 19kDa interacting protein 1, isoform CRA_d [submitted name] MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRAFIWTASTFFFKLTY SLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLLLQEVENHKKQMLSNQASWRKANLTCKIAIDNLEKAELLQG GDLLRQRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRR ELTDKLLIFLALALFLATVLYIVKKRLFPFL

	D3DQM6 - Generality top
	Primary source Uniprot : D3DQM6 Name BCL2/adenovirus E1B 19kDa interacting protein 1, isoform CRA_a [submitted name] Alternative name(s) Synonym(s) Organism Homo sapiens Length 194 aa Protein existence ---
	External Links top
	Refseq NP_053581.2   Uniprot D3DQM6   InterPro IPR005606   Pfam PF03908
	General annotation (Comments) top
	Ontologies top
	Binary interactions top
	With Uniprot accession IntAct
	Alternative product(s) top
	Sequence annotation top
	Feature key Position Length Description Feature identifier
	Sequence top
	FASTA 1  MAAPQDVHVR ICNQEIVKFD LEVKALIQDI RDCSGPLSAL TELNTKVKEK FQQLRHRIQD LEQLAKEQDK ESEKQLLLQE 81  VENHKKQMLR KTTKESLAQT SSTITESLMG ISRMMAQQVQ QSEEAMQSLV TSSRTILDAN EEFKSMSGTI QLGRKLITKY 161  NRRELTDKLL IFLALALFLA TVLYIVKKRL FPFL >sp|D3DQM6|D3DQM6_human BCL2/adenovirus E1B 19kDa interacting protein 1, isoform CRA_a [submitted name] MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQDLEQLAKEQDKESEKQLLLQE VENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKY NRRELTDKLLIFLALALFLATVLYIVKKRLFPFL

	D3DQM4 - Generality top
	Primary source Uniprot : D3DQM4 Name BCL2/adenovirus E1B 19kDa interacting protein 1, isoform CRA_b [submitted name] Alternative name(s) Synonym(s) Organism Homo sapiens Length 237 aa Protein existence ---
	External Links top
	Refseq NP_053583.2   Uniprot D3DQM4   InterPro IPR005606   Pfam PF03908
	General annotation (Comments) top
	Ontologies top
	Binary interactions top
	With Uniprot accession IntAct
	Alternative product(s) top
	Sequence annotation top
	Feature key Position Length Description Feature identifier
	Sequence top
	FASTA 1  MAAPQDVHVR ICNQEIVKFD LEVKALIQDI RDCSGPLSAL TELNTKVKEK FQQLRHRIQP VLYQRAFIWT ASTFFFKLTY 81  SLTDFSSTQH DFNSPTTPVT FSDLEQLAKE QDKESEKQLL LQEVENHKKQ MLRKTTKESL AQTSSTITES LMGISRMMAQ 161  QVQQSEEAMQ SLVTSSRTIL DANEEFKSMS GTIQLGRKLI TKYNRRELTD KLLIFLALAL FLATVLYIVK KRLFPFL >sp|D3DQM4|D3DQM4_human BCL2/adenovirus E1B 19kDa interacting protein 1, isoform CRA_b [submitted name] MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRAFIWTASTFFFKLTY SLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQ QVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL