(CAPNS1) calpain, small subunit 1 [Homo sapiens] |
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Gene
Transcript(s)
Exon(s)
Protein(s)
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Accession
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10238
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Official symbol
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CAPNS1
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Official name
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calpain, small subunit 1
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Gene type
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gene with protein product
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Organism
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Homo sapiens
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Location
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Chromosome 19 (NC_000019.9) : 36630917...36641254 (+)
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Map
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19q13.1
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Length
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10338 nt
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NM_001749.2
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CAPNS1, mRNA isoform 1
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NM_001003962.1
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CAPNS1, mRNA isoform 2
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Accession
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Name
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Organism
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Length
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P04632
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Calpain small subunit 1
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Homo sapiens
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268 aa
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Synonyms |
CALPAIN4; CDPS; CAPN4; CANPS; CANP; 30K
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Alternative name(s) |
calcium-dependent protease, small subunit; calpain 4, small subunit (30K); calpain, small polypeptide; calcium-activated neutral proteinase
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Summary |
Calpains are a ubiquitous, well-conserved family of calcium-dependent, cysteine proteases. Calpain families have been implicated in neurodegenerative processes, as their activation can be triggered by calcium influx and oxidative stress. Calpain I and II are heterodimeric with distinct large subunits associated with common small subunits, all of which are encoded by different genes. This gene encodes a small subunit common to both calpain I and II and is associated with myotonic dystrophy. Two transcript variants encoding the same protein have been identified for this gene. [provided by RefSeq].
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Related Articles in PubMed
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Go to ensembl
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1 |
GCGGGCGACA |
GCAGGGCCGC |
GGTGCAGTGT |
CCGACCCGAG |
AGTTGCGGCC |
TGAGTCACCG |
GCCCCGCCCT |
CCGGAGCCGG |
|
81 |
ACGCTGCGGG |
AGGCCCGGGA |
GCGGCAGTGG |
AACCGACTCC |
CAGAACTCCG |
GACGTGTGCG |
GCGGTAAGCG |
CCCGGCCCGT |
|
161 |
ACCCCCTCCG |
CACCCCGCAA |
CTCCGACTTT |
GGCGGCCCCC |
AGACCCGGCG |
AAACCGTGAA |
GTCTCGGCCT |
CAGGAGCCCC |
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241 |
CCAGATCCAT |
GGTCTCAGAT |
TCGAACCCTC |
AGACCTGTTC |
GATCTCCTTT |
TATGCCGTCC |
CGGGGACCCT |
TCTCCACCCT |
|
321 |
CTGTCTCATG |
ATCCAAAATA |
CAGGCCCATA |
GGTTTCAGAG |
ATACCCTGTG |
AATTCTTCCT |
TGGGGTGTCC |
TGAACCGCGA |
|
401 |
TCGTAGATCT |
GTGCCCCCAG |
TTCCAGCGGG |
GAACCCCATT |
GTCCGGGAAC |
CCAGAGCTCA |
CAGCCACGAT |
CTTAGACCCG |
|
481 |
AGCCCACAGA |
GCCAGAGGTG |
ACACTGGAAT |
CCTGCCGCTG |
GGAATACCTA |
AATTCTCAAG |
CCCACATTTG |
GGATTTCCTA |
|
561 |
AACCCCGCCC |
TGGGGCCCTT |
TAGGCCGTGG |
ATGTTTGCTC |
CGCGCCCATG |
ACCTGCCAAG |
GACCTCTACA |
TTCAGGCTGG |
|
641 |
GCTCTGGATC |
TCACATTCTA |
GCGCCCAGAC |
ATGTCGGGAA |
CGCCTTACGC |
CAACTTGGGG |
TCCCCACCAA |
GAGAACCCCC |
|
721 |
ACCAGATCTG |
CACCCTCCCC |
TTCACGCGTG |
CACCCAGTCC |
AGGCTCCCTC |
AAGCCCCACG |
GGTGCCTTTT |
AGACCTGAGG |
|
801 |
AGGTTGCAAA |
CCTGATCCCC |
CATACCTGCC |
CCACCCATCC |
GCGGACAACC |
CGCCCTCGCA |
AACTCAGACC |
CCCACCCGGA |
|
881 |
GGCTTCAGAT |
TCCTCCCAGG |
TCCAGCTGCC |
GGAAATGCGT |
GTTTGAAGGG |
AGGGTGTGGG |
CTCAGGGGCG |
AAGCACCCAC |
|
961 |
TGGTCCCCTT |
TTTTCCCCCC |
AGCAGTGAGT |
CGCAGCCATG |
TTCCTGGTTA |
ACTCGTTCTT |
GAAGGGCGGC |
GGCGGCGGCG |
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1041 |
GCGGGGGAGG |
CGGGGGCCTG |
GGTGGGGGCC |
TGGGAAATGT |
GCTTGGAGGC |
CTGATCAGCG |
GGGCCGGGGG |
CGGCGGCGGC |
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1121 |
GGCGGCGGCG |
GCGGCGGCGG |
TGGTGGAGGC |
GGCGGTGGCG |
GTGGAACGGC |
CATGCGCATC |
CTAGGCGGAG |
TCATCAGCGC |
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1201 |
CATCAGGTAA |
GGCGGAGACT |
ATCAGAGGGG |
CGGGGCCTGG |
GAATGGGAGG |
AGCCTCAGTG |
AGGCGTGGTC |
TGGGAGGGGC |
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1281 |
GTGGTCTAAA |
AATAGAATAG |
GATTAACCTG |
GAGGCTAACC |
TGGGTACATG |
AATTAGGCCG |
GGGAGGCCTG |
GTTTGAGAGT |
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1361 |
TCTGCTGTAA |
GGGGGTGGAC |
CCCAGTGAGG |
CGGATATCAG |
TCATTGGGGG |
CGGTGCTTGA |
TATGGGAGTA |
GTCTGATTGT |
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1441 |
GTGGGACCAG |
GACAATGTGG |
TCCTGAGGGG |
ACTGATGTGG |
AGTTTTGGCG |
GGTGGGGCTT |
ATGGGTCTGG |
GCTCAGCCTG |
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1521 |
CATTGGCTAA |
CCTGGAGATG |
AACGTTAAAG |
GTGCGGAGCC |
AATGCGTCTG |
AGTGACATTT |
TACGGAAGGG |
GCTTGACTTA |
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1601 |
TGAGTGTGGT |
CAGAGGTTTT |
AGGTGGGTTA |
ATGAGGAGGT |
GAGCCCAGGA |
GGAAGCAAGA |
CCTAATGGGG |
TAGGGTAAAT |
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1681 |
GGCCCAGAAT |
GGGCTGGGCT |
TGCTGGGAAC |
TGGCTGGATT |
AATGGAGAAA |
AATGCCCTGG |
TAGGGATAGG |
GCAGGTTGGC |
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1761 |
TTAATTAGCC |
ACGGCCACTT |
AGCAGTGATC |
CCTTGAAGGG |
GCGGGGACCA |
ATGGCTGGGG |
TAGGATGTTG |
GGAAGACGGG |
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1841 |
CATTTAGGAA |
GCGGGCCATG |
GAGTAGGGTC |
TTGGGCAGAT |
GGCACCTGAG |
GAGGATAAGG |
CCTTGGGAAG |
CTGGGGCAGA |
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1921 |
GCCTCTATGA |
AGTGAGCCCT |
CCAAGGGGCG |
GGGTCTTTTG |
ATTCTACGTG |
GGATTTTTTA |
GGTTTAGGGT |
GGCCAAGATG |
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2001 |
ACTGAAATCT |
GCCACTGGGT |
AGGTGTGCCT |
GGCAGGAGGG |
GAGCCTCCCA |
GGGGACCGGT |
CTCTGGGTTT |
CCTCGAGGGT |
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2081 |
GGGGTTGGCC |
TGAGGAAGGG |
AGAAGAGGGG |
CACGACCAGG |
GCAGTGTGGA |
TTGGGACAGA |
TGAGGACAAG |
AACAAATGAA |
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2161 |
AGGCACAGCA |
ACCAAGTAAG |
GAAGATAACG |
GCTGGGGTCT |
GGAGCGTTGG |
GGCTGATGGT |
TCTGTAGTGC |
TGCCCGTTGG |
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2241 |
AGGCCCCGCC |
CCTGGCACTA |
ACCCCTCCCC |
CTTATCTCTT |
CGCAGCGAGG |
CGGCTGCGCA |
GTACAACCCG |
GAGCCCCCGG |
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2321 |
TAAGCCCCCT |
CTGCAACCAG |
ACCCCCTTCT |
CCTGCCAAGG |
CCTCTTCGAG |
GTCCCATCCC |
TGTTCCTGTA |
GAGAAGCCCC |
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2401 |
ACCTTCCTCC |
CCTTCTTGTG |
AAATTCCTCT |
GCCAGTTCCT |
CCCATGCCGT |
GTCTGCAGCT |
TCGCCATGGG |
TCTTAGCCAT |
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2481 |
GCCCCACATA |
CGTGCACCCC |
ATTCACTACC |
ACCCCTCATT |
CTTTTCCTCA |
TCAAGCTGCC |
CAGCCCACTC |
TGACTTCCCC |
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2561 |
ACCCAGGGTA |
CCTGGGTTTG |
GGGAGCCGTC |
CTGGCCGGGT |
TCCCCTCCCC |
CTGCTCTGAG |
CTCTCCTCCC |
TTTGCAGCCC |
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2641 |
CCACGCACAC |
ATTACTCCAA |
CATTGAGGCC |
AACGAGAGTG |
AGGAGGTCCG |
GCAGTTCCGG |
AGACTCTTTG |
CCCAGCTGGC |
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2721 |
TGGAGATGTA |
AGTAACCTGG |
GGTCCCTGGC |
CCCGTCCTAA |
CCGTTCCATC |
CCTTCCCTTG |
TGGCTGCCCT |
TGCACACACA |
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2801 |
CCCTTGACCA |
TGACAATCCC |
AGTGTTCCCA |
TTCTCCATGA |
CATTCTCAGA |
CCCCTTTCAG |
TCACCCCTGA |
CCTGCCCCTA |
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2881 |
ACTTCCGCCC |
GCAGGACATG |
GAGGTCAGCG |
CCACAGAACT |
CATGAACATT |
CTCAATAAGG |
TTGTGACACG |
ACGTAAGTGA |
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2961 |
CCGGGGTTAA |
GGAATAGGGT |
AGATTCAGAG |
GCAGAGGGGT |
CAGAGAGGAT |
TTGACCTCTG |
GCCTCTGACT |
TTCAACCTGT |
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3041 |
TACCCACAGA |
CCCTGATCTG |
AAGACTGATG |
GTTTTGGCAT |
TGACACATGT |
CGCAGCATGG |
TGGCCGTGAT |
GGATGTATCC |
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3121 |
TTGGGGGCAG |
TGTGGGAGAG |
GCCCTGGGTG |
GACAGAGAGT |
TTTTTGAGAG |
TATGTTTGGG |
AAGCCAACAT |
GTAGCTTTCA |
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3201 |
TATCCACAGA |
TGTGGAAATG |
CATTCATCAG |
AACACAGTCA |
CCTGCAGACA |
TGTGGCGGTA |
AATCATAACA |
ATGCCAGCTG |
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3281 |
TCACAGCTGG |
CACTTTAATT |
ATATAAAGTG |
ACCGAACCGT |
CATAACCACC |
CTGTTGGACA |
GGCACAATTA |
TTATATTCCA |
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3361 |
TTTTACAGAA |
GAGGAAACTG |
AGGCTCAGTT |
TCCTGAAAGA |
AGCAGTCATT |
TGTCTCAAGT |
TATAGATAAA |
GGTCAGGCAT |
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3441 |
GGTGGCTCAT |
GCCTGTAATC |
CCAACACTTT |
GGGAGGCTAA |
GGTGGGCAGA |
TCACCTGAGG |
TCAGGAGTTT |
GAGACCAGCC |
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3521 |
TGGCCAACAT |
GGTGAAACCC |
CATCTCTATT |
AAAAATACAA |
AAATTGGCCA |
GGCACGGTGG |
CTCACACCTG |
TAATCCCAGC |
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3601 |
ACTTTGGGAG |
GCCGAGGCGG |
GCGGATCACG |
AGATCAGGAG |
ATTGAGACCA |
TCCTGGCTAA |
CACAGTGAAA |
CCCTGTCTCT |
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3681 |
ACCAAAAAAA |
AAAAAAAAAT |
TAGCCGGGCG |
TAGTGGCGGG |
CGCCTGTAGT |
CCCAGCTATT |
CGGGAGGCTG |
AAGCAGGAGA |
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3761 |
ATGGCGTGAA |
CCCGAGAGGA |
GGAGCTTGCA |
GTGAGCCGAG |
ATCGCGCCAC |
TGCACTCCAG |
CCTGGGCGAC |
AGAGCCAGAC |
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3841 |
TCTGTCTCAA |
AAAATAAAAT |
AAAAATAAAA |
ATAAAAATAG |
GCCGGGCGCC |
GTGGCTCACG |
CCTGTAATCC |
CAGCACTTTG |
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3921 |
GGAGGCCGAG |
GCGGGCGGAT |
CACGAGGTCA |
GGAGATCGAG |
ACCATCCTGG |
CTAACACGGT |
GAAACCCTGT |
CTCTACTAAA |
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4001 |
AATACAAAAA |
AATTAGCCGG |
GTGCAGTGGT |
GAGCGCCTGT |
AGTCCCAGCT |
ACTCGGGAGG |
CTGAGGCAGG |
AGAATGGCGT |
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4081 |
GAACCTGGGA |
GGCGGAGCTT |
TGCAGTGAGC |
CGAGATCGCG |
CCACTGCACT |
CCAGCCTAGG |
CGACAGAGAG |
AGACTCCGTC |
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4161 |
TCAAAAAAAA |
AAAAAAAGAA |
AAAAAAAGAA |
AAATAACAAT |
AACAAAAATT |
AGCTGGGCGT |
GGTGGTGCAC |
GCCTGTAGTC |
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4241 |
CCAGCTACTC |
GGGAGTCCCA |
GCTACTCAAG |
CAGGAGAATT |
GCTTGAACCC |
GGGAGGCGGA |
GGTTGCAGTG |
AGCAGAGGTT |
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4321 |
TCGTCACTGC |
ACTCCAGTCT |
GTGGACTCAG |
GTCTTTTGGG |
CTTGAGAACC |
CACGTTTATA |
ACAGCCACAT |
GCGCATATAC |
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4401 |
ACACACACAC |
ACCTAAGAGC |
ACACCCACAT |
ACGTGAAGGT |
GTATGAGGCA |
GTGTGCACAG |
GGACACACGT |
GTTATCTGTA |
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4481 |
CATGGGCCAG |
CCATTAGCTG |
ATCTTGGATA |
CATGCATATT |
TTTATTTATT |
TTTGTTTTAA |
AAAATATTTT |
ATAGAGAAAA |
|
4561 |
GCTTTCACTA |
TATTGACCTG |
GCAAGTCTCA |
AACTCCAGAC |
CTTAAGCAAT |
CCTTCCGCCT |
TGGCCTCCCA |
AAGTGTTGGG |
|
4641 |
ATTACAAGCT |
TGAGACACTG |
CGCCTGGCCT |
CATGCACATT |
TAACACATAG |
GGCAAACAGA |
CACATACATA |
ATATACATGT |
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4721 |
CATGTAATCA |
CAGACATATT |
GCATAGAGCA |
AAGCAATCCC |
AACTCTACCT |
CTTAACCAGG |
TTATTGAACC |
GCTCTGTGCC |
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4801 |
TCAGTTTCTC |
TCTCTGTAAA |
ATGGGTGAGT |
GATAATGGTG |
ATACCGAATC |
GGAACTACAT |
CCAAAAGGTT |
TAGCACAGTG |
|
4881 |
TATAGCGCAT |
AGTATGTGGT |
CTGTACACAT |
TAGCTCTTAA |
CTATGATCTT |
GGGTAGAGTT |
TTCAGCTTTG |
AATGTTTTCT |
|
4961 |
TCTCTGGAAA |
TAGTCCTGGT |
AGAACTGGTG |
TCCCAAGGAT |
TTAGTGAGAA |
AGTGATGTTC |
CTGAGTGGAC |
ATCAGGTGGA |
|
5041 |
TCCTGAGTTC |
AAGCGATCCA |
CCTGCCTTGG |
CTTCCCAAAG |
TGCTGGGATT |
ACAGGCATGA |
ACCACCATGC |
CTGGTCACAC |
|
5121 |
ACTTGTTTTT |
CACATATCCT |
AACATTTTTA |
TGAAATTGAG |
TTACTGTCAA |
GAATTTTCTT |
TTCTTTCTCT |
TTTTTTTTTT |
|
5201 |
TTTTTTTTGA |
GACAGAGTCT |
CACTCTGTTT |
CCCAGGCTGA |
AGTGCGGTGG |
TGCCATCTTG |
GCTCACTGCT |
AACTCCACCT |
|
5281 |
CCTAGGTTCA |
AGCAGTTCTC |
CTCCCTCAGC |
CTCCTGAATA |
GCTGGGATTA |
CAGGTGTGCG |
CTACTACAGC |
TGGCCAATTT |
|
5361 |
TTGTATTTTT |
AGTAGAGACG |
GGATTTCATC |
ATGTTGGCCA |
GGCTGGTCTC |
GAACTCCTGA |
CCTCAAGTGA |
ACCGCCTGCT |
|
5441 |
TCGGCCTCCC |
AAAGTGCTGG |
ATTGCAGGCG |
GGAGCCACCG |
TGCGTGGCCT |
ATTAAGAATT |
TTCTGAATGA |
GCAATTAACA |
|
5521 |
ACTCTTCAGG |
CAAGGAATTT |
GTACTTTAGA |
GTAGTTGAAT |
ATAATTCCTC |
ATGGTTATGT |
TTAAAGAGAA |
TCCCTATTTA |
|
5601 |
GAAATGTAAG |
TGACAATATG |
TATGGATAAA |
ATGAAAAATA |
AAACCGCACA |
CCAGGTGATA |
TGACTAGGAC |
CAAGCGGGAG |
|
5681 |
CTGGAGTTTC |
AGCCCTGGCT |
GCCCTGCTTG |
CTGTATCACC |
ATCGTGTCCA |
CAGTGCATGT |
GATGCATGCA |
TCTGGGTGTA |
|
5761 |
GCTGTCACTC |
TTCTTAACAC |
CCTCCCACCA |
GAGCGACACC |
ACAGGCAAGC |
TGGGCTTTGA |
GGAATTCAAG |
TACTTGTGGA |
|
5841 |
ACAACATCAA |
AAGGTGGCAG |
GTGTGTAGAA |
ACCTCTGAAA |
TCCCTGGCAC |
CCAGACCCCC |
AAGCCATGGA |
GACACTATGC |
|
5921 |
CCCACAATGC |
TCACTTGGAC |
CCAATGTCTC |
TGTCCTCACA |
GGCCATATAC |
AAACAGTTCG |
ACACTGACCG |
ATCAGGGACC |
|
6001 |
ATTTGCAGTA |
GTGAACTCCC |
AGGTGCCTTT |
GAGGCAGCAG |
GTATGGCTGG |
CAGGGACATG |
CTGGGGCTGG |
GAGTGGGATG |
|
6081 |
GGTGAGAAAA |
CCTCTACTCA |
GCTGGTCTGG |
GCCTGACTCC |
TGGGCATGGG |
AGTGGGTTGG |
GCCATGTGGC |
CCCCGCACCT |
|
6161 |
GAAGGACTAC |
ATCCATCTTA |
GGGTTCCACC |
TGAATGAGCA |
TCTCTATAAC |
ATGATCATCC |
GACGCTACTC |
AGATGAAAGT |
|
6241 |
GGGAACATGG |
ATTTTGACAA |
CTTCATCAGC |
TGCTTGGTCA |
GGCTGGACGC |
CATGTTCCGT |
GAGTGACAAC |
CCAGCTGTCT |
|
6321 |
TCCTGGGTGG |
GGATTCCTAT |
GACCTCTATG |
GACCAAGGTC |
TCCTCTAAGC |
CTGACTTTGA |
GGTGGGCGAT |
GCTAGGGGCA |
|
6401 |
CAGTGGTGAT |
TGAATCAGTT |
CCAGTTTCTG |
CCCTCATGGA |
GCTCACAGTC |
TGGTGGAGGA |
GACACAAGTC |
CCCAGACAGT |
|
6481 |
GACAGTTCAG |
ACTGGTGATG |
GCTGGGAGAG |
GGGAAGCTCA |
GGGCAGAGTG |
ATGGGTTGTG |
ATGGGGGCAG |
CACAGGCCGA |
|
6561 |
GGGTCTAGGG |
CTCTGGTGAG |
GGGAAGAGTG |
AGCAGAGCGT |
GCTCAGATTG |
TGCTTGGGGA |
AGCCTAGAGG |
GCAAATCCAA |
|
6641 |
TCCAGGAGGA |
ACCTGATGCA |
GCCCAAGGGG |
TCAGGGAGGG |
CTCACTGGAG |
AGGGAACATT |
GAGACCTGAG |
GGGATGAGGA |
|
6721 |
GAGAACTTAG |
TGAGAAGGTA |
GGGAATACTG |
TTGCAGGCTG |
AGGGAACAGC |
CTGTGCAAAG |
GCCTAGAAGG |
GAAAGAAGAT |
|
6801 |
GGGGCTTCTG |
ATGCTTTTTG |
TTAGATTTCT |
TTCTTTCTAT |
TTTTTTGAGA |
CAGAGTCTGC |
TGCTCTTGTT |
GCCCAGGCTG |
|
6881 |
GAGTGCAGTG |
GCATGATCAT |
GGCTGACTGC |
AGCCTCAACT |
CCTAGGCTCC |
AGCAGTCCTC |
CTGCCTCAGC |
TTACCGAATA |
|
6961 |
CCTGGGAGTA |
CAGGCACACA |
CCGCCATGCC |
TGGCTAATTT |
TTAAAATTTT |
TTGTAGAGAC |
AGGGTCTTGC |
TATGTTGCCC |
|
7041 |
AGGCTGGTCT |
TGAACTCCTG |
GGCTCCAGCA |
ATCCTCCTAC |
CTCAGCCTCC |
CAAAGCTTTG |
GTGTTACAGG |
CATGAGCCAT |
|
7121 |
TGCATGTGGC |
CTTCTGAGTG |
TTAGTGTACT |
GAATGCTGAA |
GACATGGCTG |
GGAAGTGGGG |
ATTACTGTCC |
TTATTTTGTG |
|
7201 |
AAGGAGGAAC |
TTAGGATTCA |
AGGAGGCAAA |
TTTTCATGCT |
CATAGTCACC |
CAGCTAGGAA |
GTTGTAAAGC |
CAGAATTTGA |
|
7281 |
ACTTGGATCT |
ATCTGAGATC |
TGAGCTAAGT |
AAGAGAAGGT |
AGGAGCAGTG |
AGCATGATTA |
GGTCATGCAG |
GATTGTGGGT |
|
7361 |
GCCAAGTTTG |
GGGGTGCTCA |
AACTCTACCA |
GAGACATTGG |
GGAGCCATGG |
CAGGTTCTAG |
GCAGAGGGAG |
GACAGGGTCA |
|
7441 |
GGTTTGGCTT |
TAGAAAGATC |
CCTTGGCCTC |
GGCTGGGCAC |
GGTGGCTCAC |
GCCTGTAATC |
CCAGCACTTT |
GGGAGGCCGA |
|
7521 |
GGAGGGCGGA |
TCACGAGGTC |
AGGAGTTCGA |
GACCATCCTG |
GCTAACACAG |
TGAAACCCCA |
TCTCTACTAA |
AAATACAAAA |
|
7601 |
AATTAGCCAG |
GTGTGGTGGC |
GGGCGCCTGT |
AGTCCCAGCT |
ACTTGGGAGG |
CTGAGGCGGG |
AGAATGGCAT |
GAACCCAGGA |
|
7681 |
GGCGGAGCTT |
GCAGTGAGCT |
GAGATCTGCC |
ACTGCACTCC |
AGCCTGGGTG |
ACAGATCGAG |
ACTCCGTCTT |
AAAAAAAAAA |
|
7761 |
AATCCCTTGG |
CCTCCAGGCC |
GGGTGCAGTG |
GCTTATGCCT |
GTAATCCCAG |
CACTCTGGGA |
GGCTGAGGTG |
GGCGTAAAAC |
|
7841 |
CTGAGGTCAG |
GAGTTCAAGA |
CCAGCCTGGC |
CAACATGGCG |
AAACCCCGCA |
TCTACTAACG |
ATACAAAAGT |
TAGCCAGGCG |
|
7921 |
TGGGGGCGTG |
TCTGTAGTCC |
CAGCTACTCA |
GGAGGTTTAG |
GGAGGGAGAA |
TTGCTTGAAC |
CCAGGAAGCG |
GAGGTTGCAG |
|
8001 |
TGAGCAGAGG |
TCATGCCATT |
GCACTCCAGC |
CTCCAACCTG |
GGTGACAAGA |
GCGAGATTCC |
ATCTCAAAAA |
AAAAAAAAGA |
|
8081 |
AAAAAAGATC |
CCTTGGCCTC |
CAGAGAGCCC |
ACAATGCATG |
AAAAGTAACA |
GAGGAAAAGA |
AGCAGGTATG |
TGAGATAGCA |
|
8161 |
GGGAGGTGAA |
GGGAGTGGAC |
AGACAAGGTT |
GATGCCACAA |
GTCACATAAG |
AGGGGCCAGG |
AAATAGCCAC |
TGGATCTACC |
|
8241 |
AGCAAGAAGG |
CTGATAGTCG |
GGAGGATCAT |
TTGAGTCCAG |
GAGTTTGAGA |
CCAGCCTGGG |
CAATGTAGTA |
GGACTCCATC |
|
8321 |
TCTACAAAAA |
AAAAAAAATA |
TATGTATATA |
GACATAGCCG |
GGCATGGTGG |
CACATGCCTG |
TGGTCTCAGT |
TGCTCGGGAG |
|
8401 |
GCTGAGGTAG |
GAGAATCACT |
TGAGCCCGGG |
AGGGTGAGGC |
TGCAGTGAGC |
TATGATCTTG |
CCACTGGACT |
CCAGCCTGGG |
|
8481 |
CCACAGAGAC |
ACCGTCTAAA |
AAAAAAAAAA |
AAAGGGCTGG |
GCATGGTGGC |
TCACTCCTGT |
AATCCCAGCA |
CTTTGGGAGG |
|
8561 |
CCGAGGTGGG |
CGGATCACCT |
GATGTCAGGA |
GTTTGAGACC |
AGCCTGGCCA |
ACATAGTGAA |
ACCCCGTCTC |
TACTAAAAAT |
|
8641 |
ACAAAAAAAT |
TAGCCAGGCG |
TGGTGGTGCA |
CGCCTGTAGT |
CCCAGCTACT |
CAGGAGGCTG |
AGGCAGGAGA |
ATCACTTGAA |
|
8721 |
CCTGGGAGGC |
AAAGGTTGCA |
GTGAGCCAAG |
ATCGTGCCAC |
TGCACTCCAG |
CCTGGGCAAC |
AGAGTGGGAC |
TCTGTCTCAA |
|
8801 |
AAAAAAAAAG |
AAAGAAAGGC |
AGCCAGGGTG |
TGCAGGACGC |
TGTGGGTATG |
GACACCTGAG |
GGTGGTGGTA |
ACTGAGCGGA |
|
8881 |
GATAGTGTAG |
TCATCATGTC |
TAGATTCCCT |
GTGGGTGGGG |
AACATGGAGT |
CAAGTTTCAG |
GGCAGGCGTG |
GGGACCTACC |
|
8961 |
TGTAAGACTC |
TAGGGGCAGG |
AAGTAGAGTG |
TGCAGAGCCT |
CCCTCTAGTA |
GCCTGTTAGG |
CTTAGAACTG |
GAGAGGATGG |
|
9041 |
AGCATAGATG |
TCAGTAGGAG |
GCTGGGGCTG |
GGCAGAGGTG |
ATATCAGTAC |
ACAGAGGCCA |
TTATTGAGGA |
GGGTAACAGA |
|
9121 |
TTGGATTCCA |
ATCCTGATTT |
CTTCACTTTC |
TTGCTATGTG |
ACCTGGGGCA |
TGGCCCCTCC |
CTTCCTGCCT |
CATTTCTTTT |
|
9201 |
TTTCCTGTTT |
TTAATTTTTA |
GTTTTTTTAA |
AAAGCAGAGA |
TGAGGTCTCT |
GTTGCCCAGG |
TTGGTCTCGA |
ACTCCTGGGC |
|
9281 |
GGCTCAAGTG |
ATCCTCCCAT |
CTTGGCCTTC |
CAAAGTGTTG |
GGATTATAGG |
TGTGAGCCAC |
CACGCCCAGC |
CTGTGCCTCA |
|
9361 |
TTTTAAAATG |
ACACTTATCT |
CACAGAGTTG |
GATTAAATCA |
GCCAATACCT |
GGAAAGCACT |
TTACCCCATG |
CTTGGCACAC |
|
9441 |
AGTAAATACT |
CAGTGAAGTG |
CCAGCTGCTA |
TGATTGTCAT |
CCCATGTATT |
TGTGTAATGT |
TATTATGCCA |
AAAACCAGTC |
|
9521 |
TCCTTCCTTC |
CCTGCCGCCA |
AACCTCTGCA |
TCTCCTCCTC |
CAGGTGCCTT |
CAAATCTCTT |
GACAAAGATG |
GCACTGGACA |
|
9601 |
AATCCAGGTG |
AACATCCAGG |
AGGTAAGGAC |
CCCCATATTG |
GGGTATGGGT |
GCCTGGGAGG |
ACCCCACCCC |
TCAGCCCTTC |
|
9681 |
ATACCAGCTC |
TGAGCTGCAG |
TCCCCTTCCT |
CCTATTTTGC |
CAGCCGTCCC |
TGGGTGAGGG |
CAAAGGGGCT |
GGTGCTCTTG |
|
9761 |
GGGTTCCCTG |
TCCTCACTCT |
CCACCCTCCT |
CTCCCCAGTG |
GCTGCAGCTG |
ACTATGTATT |
CCTGAACTGG |
AGCCCCAGAC |
|
9841 |
CCGCCCCCTC |
ACTGCCTTGC |
TATAGGAGTC |
ACCTGGAGCC |
TCGGTCTCTC |
CCAGGGCCGA |
TCCTGTCTGC |
AGTCACATCT |
|
9921 |
TTGTGGGGCC |
TGCTGACCCA |
CAAGCTTTTG |
TTCTCTCAGT |
ACTTGTTACC |
CAGCTTCTCA |
ACATCCAGGG |
CCCAATTTGC |
|
10001 |
CCTGCCTGGA |
GTTCCCCCTG |
GCTCTAGGAC |
ACTCTAACAA |
GCTCTGTCCA |
CGGGTCTCCC |
CATTCCCACC |
AGGCCCTGCA |
|
10081 |
CACACCCACT |
CCGTAACCTC |
TCCCCTGTAC |
CTGTGCCAAG |
CCTAGCACTT |
GTGATGCCTC |
CATGCCCCGA |
GGGCCCTCTC |
|
10161 |
TCAGTTCTGG |
GAGGATGACT |
CCAGTCCCTG |
CACGCCCTGG |
CACACCCTTC |
ACGGTTGCTA |
CCCAGGCGGC |
CAAGCTCCAG |
|
10241 |
ACCGTGCCAG |
ACCCAGGTGC |
CCCAGTGCCT |
TTGTCTATAT |
TCTGCTCCCA |
GCCTGCCAGG |
CCCAGGAGGA |
AATAAACATG |
|
10321 |
CCCCAGTTGC |
TGATCTCT |
|
|
|
|
|
|
|
|
|
|
|
|
>ref|Gene_ID:826|CAPNS1|NC_000019.9:36630917...36641254 (+)
GCGGGCGACAGCAGGGCCGCGGTGCAGTGTCCGACCCGAGAGTTGCGGCCTGAGTCACCGGCCCCGCCCTCCGGAGCCGG
ACGCTGCGGGAGGCCCGGGAGCGGCAGTGGAACCGACTCCCAGAACTCCGGACGTGTGCGGCGGTAAGCGCCCGGCCCGT
ACCCCCTCCGCACCCCGCAACTCCGACTTTGGCGGCCCCCAGACCCGGCGAAACCGTGAAGTCTCGGCCTCAGGAGCCCC
CCAGATCCATGGTCTCAGATTCGAACCCTCAGACCTGTTCGATCTCCTTTTATGCCGTCCCGGGGACCCTTCTCCACCCT
CTGTCTCATGATCCAAAATACAGGCCCATAGGTTTCAGAGATACCCTGTGAATTCTTCCTTGGGGTGTCCTGAACCGCGA
TCGTAGATCTGTGCCCCCAGTTCCAGCGGGGAACCCCATTGTCCGGGAACCCAGAGCTCACAGCCACGATCTTAGACCCG
AGCCCACAGAGCCAGAGGTGACACTGGAATCCTGCCGCTGGGAATACCTAAATTCTCAAGCCCACATTTGGGATTTCCTA
AACCCCGCCCTGGGGCCCTTTAGGCCGTGGATGTTTGCTCCGCGCCCATGACCTGCCAAGGACCTCTACATTCAGGCTGG
GCTCTGGATCTCACATTCTAGCGCCCAGACATGTCGGGAACGCCTTACGCCAACTTGGGGTCCCCACCAAGAGAACCCCC
ACCAGATCTGCACCCTCCCCTTCACGCGTGCACCCAGTCCAGGCTCCCTCAAGCCCCACGGGTGCCTTTTAGACCTGAGG
AGGTTGCAAACCTGATCCCCCATACCTGCCCCACCCATCCGCGGACAACCCGCCCTCGCAAACTCAGACCCCCACCCGGA
GGCTTCAGATTCCTCCCAGGTCCAGCTGCCGGAAATGCGTGTTTGAAGGGAGGGTGTGGGCTCAGGGGCGAAGCACCCAC
TGGTCCCCTTTTTTCCCCCCAGCAGTGAGTCGCAGCCATGTTCCTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGCG
GCGGGGGAGGCGGGGGCCTGGGTGGGGGCCTGGGAAATGTGCTTGGAGGCCTGATCAGCGGGGCCGGGGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGGTGGTGGAGGCGGCGGTGGCGGTGGAACGGCCATGCGCATCCTAGGCGGAGTCATCAGCGC
CATCAGGTAAGGCGGAGACTATCAGAGGGGCGGGGCCTGGGAATGGGAGGAGCCTCAGTGAGGCGTGGTCTGGGAGGGGC
GTGGTCTAAAAATAGAATAGGATTAACCTGGAGGCTAACCTGGGTACATGAATTAGGCCGGGGAGGCCTGGTTTGAGAGT
TCTGCTGTAAGGGGGTGGACCCCAGTGAGGCGGATATCAGTCATTGGGGGCGGTGCTTGATATGGGAGTAGTCTGATTGT
GTGGGACCAGGACAATGTGGTCCTGAGGGGACTGATGTGGAGTTTTGGCGGGTGGGGCTTATGGGTCTGGGCTCAGCCTG
CATTGGCTAACCTGGAGATGAACGTTAAAGGTGCGGAGCCAATGCGTCTGAGTGACATTTTACGGAAGGGGCTTGACTTA
TGAGTGTGGTCAGAGGTTTTAGGTGGGTTAATGAGGAGGTGAGCCCAGGAGGAAGCAAGACCTAATGGGGTAGGGTAAAT
GGCCCAGAATGGGCTGGGCTTGCTGGGAACTGGCTGGATTAATGGAGAAAAATGCCCTGGTAGGGATAGGGCAGGTTGGC
TTAATTAGCCACGGCCACTTAGCAGTGATCCCTTGAAGGGGCGGGGACCAATGGCTGGGGTAGGATGTTGGGAAGACGGG
CATTTAGGAAGCGGGCCATGGAGTAGGGTCTTGGGCAGATGGCACCTGAGGAGGATAAGGCCTTGGGAAGCTGGGGCAGA
GCCTCTATGAAGTGAGCCCTCCAAGGGGCGGGGTCTTTTGATTCTACGTGGGATTTTTTAGGTTTAGGGTGGCCAAGATG
ACTGAAATCTGCCACTGGGTAGGTGTGCCTGGCAGGAGGGGAGCCTCCCAGGGGACCGGTCTCTGGGTTTCCTCGAGGGT
GGGGTTGGCCTGAGGAAGGGAGAAGAGGGGCACGACCAGGGCAGTGTGGATTGGGACAGATGAGGACAAGAACAAATGAA
AGGCACAGCAACCAAGTAAGGAAGATAACGGCTGGGGTCTGGAGCGTTGGGGCTGATGGTTCTGTAGTGCTGCCCGTTGG
AGGCCCCGCCCCTGGCACTAACCCCTCCCCCTTATCTCTTCGCAGCGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGG
TAAGCCCCCTCTGCAACCAGACCCCCTTCTCCTGCCAAGGCCTCTTCGAGGTCCCATCCCTGTTCCTGTAGAGAAGCCCC
ACCTTCCTCCCCTTCTTGTGAAATTCCTCTGCCAGTTCCTCCCATGCCGTGTCTGCAGCTTCGCCATGGGTCTTAGCCAT
GCCCCACATACGTGCACCCCATTCACTACCACCCCTCATTCTTTTCCTCATCAAGCTGCCCAGCCCACTCTGACTTCCCC
ACCCAGGGTACCTGGGTTTGGGGAGCCGTCCTGGCCGGGTTCCCCTCCCCCTGCTCTGAGCTCTCCTCCCTTTGCAGCCC
CCACGCACACATTACTCCAACATTGAGGCCAACGAGAGTGAGGAGGTCCGGCAGTTCCGGAGACTCTTTGCCCAGCTGGC
TGGAGATGTAAGTAACCTGGGGTCCCTGGCCCCGTCCTAACCGTTCCATCCCTTCCCTTGTGGCTGCCCTTGCACACACA
CCCTTGACCATGACAATCCCAGTGTTCCCATTCTCCATGACATTCTCAGACCCCTTTCAGTCACCCCTGACCTGCCCCTA
ACTTCCGCCCGCAGGACATGGAGGTCAGCGCCACAGAACTCATGAACATTCTCAATAAGGTTGTGACACGACGTAAGTGA
CCGGGGTTAAGGAATAGGGTAGATTCAGAGGCAGAGGGGTCAGAGAGGATTTGACCTCTGGCCTCTGACTTTCAACCTGT
TACCCACAGACCCTGATCTGAAGACTGATGGTTTTGGCATTGACACATGTCGCAGCATGGTGGCCGTGATGGATGTATCC
TTGGGGGCAGTGTGGGAGAGGCCCTGGGTGGACAGAGAGTTTTTTGAGAGTATGTTTGGGAAGCCAACATGTAGCTTTCA
TATCCACAGATGTGGAAATGCATTCATCAGAACACAGTCACCTGCAGACATGTGGCGGTAAATCATAACAATGCCAGCTG
TCACAGCTGGCACTTTAATTATATAAAGTGACCGAACCGTCATAACCACCCTGTTGGACAGGCACAATTATTATATTCCA
TTTTACAGAAGAGGAAACTGAGGCTCAGTTTCCTGAAAGAAGCAGTCATTTGTCTCAAGTTATAGATAAAGGTCAGGCAT
GGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCTAAGGTGGGCAGATCACCTGAGGTCAGGAGTTTGAGACCAGCC
TGGCCAACATGGTGAAACCCCATCTCTATTAAAAATACAAAAATTGGCCAGGCACGGTGGCTCACACCTGTAATCCCAGC
ACTTTGGGAGGCCGAGGCGGGCGGATCACGAGATCAGGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCTGTCTCT
ACCAAAAAAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTATTCGGGAGGCTGAAGCAGGAGA
ATGGCGTGAACCCGAGAGGAGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCCAGAC
TCTGTCTCAAAAAATAAAATAAAAATAAAAATAAAAATAGGCCGGGCGCCGTGGCTCACGCCTGTAATCCCAGCACTTTG
GGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAA
AATACAAAAAAATTAGCCGGGTGCAGTGGTGAGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGT
GAACCTGGGAGGCGGAGCTTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTAGGCGACAGAGAGAGACTCCGTC
TCAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAATAACAATAACAAAAATTAGCTGGGCGTGGTGGTGCACGCCTGTAGTC
CCAGCTACTCGGGAGTCCCAGCTACTCAAGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCAGAGGTT
TCGTCACTGCACTCCAGTCTGTGGACTCAGGTCTTTTGGGCTTGAGAACCCACGTTTATAACAGCCACATGCGCATATAC
ACACACACACACCTAAGAGCACACCCACATACGTGAAGGTGTATGAGGCAGTGTGCACAGGGACACACGTGTTATCTGTA
CATGGGCCAGCCATTAGCTGATCTTGGATACATGCATATTTTTATTTATTTTTGTTTTAAAAAATATTTTATAGAGAAAA
GCTTTCACTATATTGACCTGGCAAGTCTCAAACTCCAGACCTTAAGCAATCCTTCCGCCTTGGCCTCCCAAAGTGTTGGG
ATTACAAGCTTGAGACACTGCGCCTGGCCTCATGCACATTTAACACATAGGGCAAACAGACACATACATAATATACATGT
CATGTAATCACAGACATATTGCATAGAGCAAAGCAATCCCAACTCTACCTCTTAACCAGGTTATTGAACCGCTCTGTGCC
TCAGTTTCTCTCTCTGTAAAATGGGTGAGTGATAATGGTGATACCGAATCGGAACTACATCCAAAAGGTTTAGCACAGTG
TATAGCGCATAGTATGTGGTCTGTACACATTAGCTCTTAACTATGATCTTGGGTAGAGTTTTCAGCTTTGAATGTTTTCT
TCTCTGGAAATAGTCCTGGTAGAACTGGTGTCCCAAGGATTTAGTGAGAAAGTGATGTTCCTGAGTGGACATCAGGTGGA
TCCTGAGTTCAAGCGATCCACCTGCCTTGGCTTCCCAAAGTGCTGGGATTACAGGCATGAACCACCATGCCTGGTCACAC
ACTTGTTTTTCACATATCCTAACATTTTTATGAAATTGAGTTACTGTCAAGAATTTTCTTTTCTTTCTCTTTTTTTTTTT
TTTTTTTTGAGACAGAGTCTCACTCTGTTTCCCAGGCTGAAGTGCGGTGGTGCCATCTTGGCTCACTGCTAACTCCACCT
CCTAGGTTCAAGCAGTTCTCCTCCCTCAGCCTCCTGAATAGCTGGGATTACAGGTGTGCGCTACTACAGCTGGCCAATTT
TTGTATTTTTAGTAGAGACGGGATTTCATCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGAACCGCCTGCT
TCGGCCTCCCAAAGTGCTGGATTGCAGGCGGGAGCCACCGTGCGTGGCCTATTAAGAATTTTCTGAATGAGCAATTAACA
ACTCTTCAGGCAAGGAATTTGTACTTTAGAGTAGTTGAATATAATTCCTCATGGTTATGTTTAAAGAGAATCCCTATTTA
GAAATGTAAGTGACAATATGTATGGATAAAATGAAAAATAAAACCGCACACCAGGTGATATGACTAGGACCAAGCGGGAG
CTGGAGTTTCAGCCCTGGCTGCCCTGCTTGCTGTATCACCATCGTGTCCACAGTGCATGTGATGCATGCATCTGGGTGTA
GCTGTCACTCTTCTTAACACCCTCCCACCAGAGCGACACCACAGGCAAGCTGGGCTTTGAGGAATTCAAGTACTTGTGGA
ACAACATCAAAAGGTGGCAGGTGTGTAGAAACCTCTGAAATCCCTGGCACCCAGACCCCCAAGCCATGGAGACACTATGC
CCCACAATGCTCACTTGGACCCAATGTCTCTGTCCTCACAGGCCATATACAAACAGTTCGACACTGACCGATCAGGGACC
ATTTGCAGTAGTGAACTCCCAGGTGCCTTTGAGGCAGCAGGTATGGCTGGCAGGGACATGCTGGGGCTGGGAGTGGGATG
GGTGAGAAAACCTCTACTCAGCTGGTCTGGGCCTGACTCCTGGGCATGGGAGTGGGTTGGGCCATGTGGCCCCCGCACCT
GAAGGACTACATCCATCTTAGGGTTCCACCTGAATGAGCATCTCTATAACATGATCATCCGACGCTACTCAGATGAAAGT
GGGAACATGGATTTTGACAACTTCATCAGCTGCTTGGTCAGGCTGGACGCCATGTTCCGTGAGTGACAACCCAGCTGTCT
TCCTGGGTGGGGATTCCTATGACCTCTATGGACCAAGGTCTCCTCTAAGCCTGACTTTGAGGTGGGCGATGCTAGGGGCA
CAGTGGTGATTGAATCAGTTCCAGTTTCTGCCCTCATGGAGCTCACAGTCTGGTGGAGGAGACACAAGTCCCCAGACAGT
GACAGTTCAGACTGGTGATGGCTGGGAGAGGGGAAGCTCAGGGCAGAGTGATGGGTTGTGATGGGGGCAGCACAGGCCGA
GGGTCTAGGGCTCTGGTGAGGGGAAGAGTGAGCAGAGCGTGCTCAGATTGTGCTTGGGGAAGCCTAGAGGGCAAATCCAA
TCCAGGAGGAACCTGATGCAGCCCAAGGGGTCAGGGAGGGCTCACTGGAGAGGGAACATTGAGACCTGAGGGGATGAGGA
GAGAACTTAGTGAGAAGGTAGGGAATACTGTTGCAGGCTGAGGGAACAGCCTGTGCAAAGGCCTAGAAGGGAAAGAAGAT
GGGGCTTCTGATGCTTTTTGTTAGATTTCTTTCTTTCTATTTTTTTGAGACAGAGTCTGCTGCTCTTGTTGCCCAGGCTG
GAGTGCAGTGGCATGATCATGGCTGACTGCAGCCTCAACTCCTAGGCTCCAGCAGTCCTCCTGCCTCAGCTTACCGAATA
CCTGGGAGTACAGGCACACACCGCCATGCCTGGCTAATTTTTAAAATTTTTTGTAGAGACAGGGTCTTGCTATGTTGCCC
AGGCTGGTCTTGAACTCCTGGGCTCCAGCAATCCTCCTACCTCAGCCTCCCAAAGCTTTGGTGTTACAGGCATGAGCCAT
TGCATGTGGCCTTCTGAGTGTTAGTGTACTGAATGCTGAAGACATGGCTGGGAAGTGGGGATTACTGTCCTTATTTTGTG
AAGGAGGAACTTAGGATTCAAGGAGGCAAATTTTCATGCTCATAGTCACCCAGCTAGGAAGTTGTAAAGCCAGAATTTGA
ACTTGGATCTATCTGAGATCTGAGCTAAGTAAGAGAAGGTAGGAGCAGTGAGCATGATTAGGTCATGCAGGATTGTGGGT
GCCAAGTTTGGGGGTGCTCAAACTCTACCAGAGACATTGGGGAGCCATGGCAGGTTCTAGGCAGAGGGAGGACAGGGTCA
GGTTTGGCTTTAGAAAGATCCCTTGGCCTCGGCTGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA
GGAGGGCGGATCACGAGGTCAGGAGTTCGAGACCATCCTGGCTAACACAGTGAAACCCCATCTCTACTAAAAATACAAAA
AATTAGCCAGGTGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCATGAACCCAGGA
GGCGGAGCTTGCAGTGAGCTGAGATCTGCCACTGCACTCCAGCCTGGGTGACAGATCGAGACTCCGTCTTAAAAAAAAAA
AATCCCTTGGCCTCCAGGCCGGGTGCAGTGGCTTATGCCTGTAATCCCAGCACTCTGGGAGGCTGAGGTGGGCGTAAAAC
CTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCGAAACCCCGCATCTACTAACGATACAAAAGTTAGCCAGGCG
TGGGGGCGTGTCTGTAGTCCCAGCTACTCAGGAGGTTTAGGGAGGGAGAATTGCTTGAACCCAGGAAGCGGAGGTTGCAG
TGAGCAGAGGTCATGCCATTGCACTCCAGCCTCCAACCTGGGTGACAAGAGCGAGATTCCATCTCAAAAAAAAAAAAAGA
AAAAAAGATCCCTTGGCCTCCAGAGAGCCCACAATGCATGAAAAGTAACAGAGGAAAAGAAGCAGGTATGTGAGATAGCA
GGGAGGTGAAGGGAGTGGACAGACAAGGTTGATGCCACAAGTCACATAAGAGGGGCCAGGAAATAGCCACTGGATCTACC
AGCAAGAAGGCTGATAGTCGGGAGGATCATTTGAGTCCAGGAGTTTGAGACCAGCCTGGGCAATGTAGTAGGACTCCATC
TCTACAAAAAAAAAAAAATATATGTATATAGACATAGCCGGGCATGGTGGCACATGCCTGTGGTCTCAGTTGCTCGGGAG
GCTGAGGTAGGAGAATCACTTGAGCCCGGGAGGGTGAGGCTGCAGTGAGCTATGATCTTGCCACTGGACTCCAGCCTGGG
CCACAGAGACACCGTCTAAAAAAAAAAAAAAAAGGGCTGGGCATGGTGGCTCACTCCTGTAATCCCAGCACTTTGGGAGG
CCGAGGTGGGCGGATCACCTGATGTCAGGAGTTTGAGACCAGCCTGGCCAACATAGTGAAACCCCGTCTCTACTAAAAAT
ACAAAAAAATTAGCCAGGCGTGGTGGTGCACGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAA
CCTGGGAGGCAAAGGTTGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGGCAACAGAGTGGGACTCTGTCTCAA
AAAAAAAAAGAAAGAAAGGCAGCCAGGGTGTGCAGGACGCTGTGGGTATGGACACCTGAGGGTGGTGGTAACTGAGCGGA
GATAGTGTAGTCATCATGTCTAGATTCCCTGTGGGTGGGGAACATGGAGTCAAGTTTCAGGGCAGGCGTGGGGACCTACC
TGTAAGACTCTAGGGGCAGGAAGTAGAGTGTGCAGAGCCTCCCTCTAGTAGCCTGTTAGGCTTAGAACTGGAGAGGATGG
AGCATAGATGTCAGTAGGAGGCTGGGGCTGGGCAGAGGTGATATCAGTACACAGAGGCCATTATTGAGGAGGGTAACAGA
TTGGATTCCAATCCTGATTTCTTCACTTTCTTGCTATGTGACCTGGGGCATGGCCCCTCCCTTCCTGCCTCATTTCTTTT
TTTCCTGTTTTTAATTTTTAGTTTTTTTAAAAAGCAGAGATGAGGTCTCTGTTGCCCAGGTTGGTCTCGAACTCCTGGGC
GGCTCAAGTGATCCTCCCATCTTGGCCTTCCAAAGTGTTGGGATTATAGGTGTGAGCCACCACGCCCAGCCTGTGCCTCA
TTTTAAAATGACACTTATCTCACAGAGTTGGATTAAATCAGCCAATACCTGGAAAGCACTTTACCCCATGCTTGGCACAC
AGTAAATACTCAGTGAAGTGCCAGCTGCTATGATTGTCATCCCATGTATTTGTGTAATGTTATTATGCCAAAAACCAGTC
TCCTTCCTTCCCTGCCGCCAAACCTCTGCATCTCCTCCTCCAGGTGCCTTCAAATCTCTTGACAAAGATGGCACTGGACA
AATCCAGGTGAACATCCAGGAGGTAAGGACCCCCATATTGGGGTATGGGTGCCTGGGAGGACCCCACCCCTCAGCCCTTC
ATACCAGCTCTGAGCTGCAGTCCCCTTCCTCCTATTTTGCCAGCCGTCCCTGGGTGAGGGCAAAGGGGCTGGTGCTCTTG
GGGTTCCCTGTCCTCACTCTCCACCCTCCTCTCCCCAGTGGCTGCAGCTGACTATGTATTCCTGAACTGGAGCCCCAGAC
CCGCCCCCTCACTGCCTTGCTATAGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACATCT
TTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGC
CCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGCA
CACACCCACTCCGTAACCTCTCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGATGCCTCCATGCCCCGAGGGCCCTCTC
TCAGTTCTGGGAGGATGACTCCAGTCCCTGCACGCCCTGGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAG
ACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGCTCCCAGCCTGCCAGGCCCAGGAGGAAATAAACATG
CCCCAGTTGCTGATCTCT
|
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| |
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|
Primary source |
RefSeq : NM_001749.2 (GI:51599152)
|
Name |
Calpain, small subunit 1 (CAPNS1), transcript variant 1
|
Type of transcript |
mRNA
|
Organism |
Homo sapiens
|
Length |
1492 nt
|
Map |
19q13.12
|
Location |
Chromosome 19 (NC_000019.9) strand : +
36630917...36631058 | 36631898...36632121 | 36633201...36633234 | 36633553...36633642 |
36633810...36633867 | 36633965...36634029 | 36636707...36636775 | 36636877...36636955 |
36637097...36637213 | 36640479...36640537 | 36640714...36641254 |
|
|
|
|
|
|
|
|
|
|
|
|
|
Exon(s) |
Start |
End |
Length |
is coding |
Exon 1
|
1
|
142
|
142
|
1
|
Exon 2a
|
143
|
366
|
224
|
1
|
Exon 3
|
367
|
400
|
34
|
1
|
Exon 4
|
401
|
490
|
90
|
1
|
Exon 5
|
491
|
548
|
58
|
1
|
Exon 6
|
549
|
613
|
65
|
1
|
Exon 7
|
614
|
682
|
69
|
1
|
Exon 8
|
683
|
761
|
79
|
1
|
Exon 9
|
762
|
878
|
117
|
1
|
Exon 10
|
879
|
937
|
59
|
1
|
Exon 11
|
938
|
1478
|
541
|
1
|
|
|
|
|
|
|
|
|
|
|
|
|
ID |
Class |
Location |
Mutation |
Length |
is synonymous |
Source |
|
|
|
|
|
|
|
|
|
|
|
|
Primary source |
NCBI : CCDS12489
|
Nucleotide |
CAPNS1, mRNA isoform 1[NM_001749.2] : 158...964
|
Length |
807
|
Location |
Chromosome 19 (NC_000019.9) strand : +
36631913...36632121 | 36633201...36633234 | 36633553...36633642 | 36633810...36633867 |
36633965...36634029 | 36636707...36636775 | 36636877...36636955 | 36637097...36637213 |
36640479...36640537 | 36640714...36640740 |
|
Start codon |
1
|
Translation |
NP_001740.1 |
|
|
|
|
|
|
|
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|
|
|
|
1 |
CGGGCGACAG |
CAGGGCCGCG |
GTGCAGTGTC |
CGACCCGAGA |
GTTGCGGCCT |
GAGTCACCGG |
CCCCGCCCTC |
CGGAGCCGGA |
|
81 |
CGCTGCGGGA |
GGCCCGGGAG |
CGGCAGTGGA |
ACCGACTCCC |
AGAACTCCGG |
ACGTGTGCGG |
CGCAGTGAGT |
CGCAGCCATG |
|
161 |
TTCCTGGTTA |
ACTCGTTCTT |
GAAGGGCGGC |
GGCGGCGGCG |
GCGGGGGAGG |
CGGGGGCCTG |
GGTGGGGGCC |
TGGGAAATGT |
|
241 |
GCTTGGAGGC |
CTGATCAGCG |
GGGCCGGGGG |
CGGCGGCGGC |
GGCGGCGGCG |
GCGGCGGCGG |
TGGTGGAGGC |
GGCGGTGGCG |
|
321 |
GTGGAACGGC |
CATGCGCATC |
CTAGGCGGAG |
TCATCAGCGC |
CATCAGCGAG |
GCGGCTGCGC |
AGTACAACCC |
GGAGCCCCCG |
|
401 |
CCCCCACGCA |
CACATTACTC |
CAACATTGAG |
GCCAACGAGA |
GTGAGGAGGT |
CCGGCAGTTC |
CGGAGACTCT |
TTGCCCAGCT |
|
481 |
GGCTGGAGAT |
GACATGGAGG |
TCAGCGCCAC |
AGAACTCATG |
AACATTCTCA |
ATAAGGTTGT |
GACACGACAC |
CCTGATCTGA |
|
561 |
AGACTGATGG |
TTTTGGCATT |
GACACATGTC |
GCAGCATGGT |
GGCCGTGATG |
GATAGCGACA |
CCACAGGCAA |
GCTGGGCTTT |
|
641 |
GAGGAATTCA |
AGTACTTGTG |
GAACAACATC |
AAAAGGTGGC |
AGGCCATATA |
CAAACAGTTC |
GACACTGACC |
GATCAGGGAC |
|
721 |
CATTTGCAGT |
AGTGAACTCC |
CAGGTGCCTT |
TGAGGCAGCA |
GGGTTCCACC |
TGAATGAGCA |
TCTCTATAAC |
ATGATCATCC |
|
801 |
GACGCTACTC |
AGATGAAAGT |
GGGAACATGG |
ATTTTGACAA |
CTTCATCAGC |
TGCTTGGTCA |
GGCTGGACGC |
CATGTTCCGT |
|
881 |
GCCTTCAAAT |
CTCTTGACAA |
AGATGGCACT |
GGACAAATCC |
AGGTGAACAT |
CCAGGAGTGG |
CTGCAGCTGA |
CTATGTATTC |
|
961 |
CTGAACTGGA |
GCCCCAGACC |
CGCCCCCTCA |
CTGCCTTGCT |
ATAGGAGTCA |
CCTGGAGCCT |
CGGTCTCTCC |
CAGGGCCGAT |
|
1041 |
CCTGTCTGCA |
GTCACATCTT |
TGTGGGGCCT |
GCTGACCCAC |
AAGCTTTTGT |
TCTCTCAGTA |
CTTGTTACCC |
AGCTTCTCAA |
|
1121 |
CATCCAGGGC |
CCAATTTGCC |
CTGCCTGGAG |
TTCCCCCTGG |
CTCTAGGACA |
CTCTAACAAG |
CTCTGTCCAC |
GGGTCTCCCC |
|
1201 |
ATTCCCACCA |
GGCCCTGCAC |
ACACCCACTC |
CGTAACCTCT |
CCCCTGTACC |
TGTGCCAAGC |
CTAGCACTTG |
TGATGCCTCC |
|
1281 |
ATGCCCCGAG |
GGCCCTCTCT |
CAGTTCTGGG |
AGGATGACTC |
CAGTCCCTGC |
ACGCCCTGGC |
ACACCCTTCA |
CGGTTGCTAC |
|
1361 |
CCAGGCGGCC |
AAGCTCCAGA |
CCGTGCCAGA |
CCCAGGTGCC |
CCAGTGCCTT |
TGTCTATATT |
CTGCTCCCAG |
CCTGCCAGGC |
|
1441 |
CCAGGAGGAA |
ATAAACATGC |
CCCAGTTGCT |
GATCTCTAAA |
AAAAAAAAAA |
AA |
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>gi|51599152|ref|NM_001749.2|Calpain, small subunit 1 (CAPNS1), transcript variant 1
CGGGCGACAGCAGGGCCGCGGTGCAGTGTCCGACCCGAGAGTTGCGGCCTGAGTCACCGGCCCCGCCCTCCGGAGCCGGA
CGCTGCGGGAGGCCCGGGAGCGGCAGTGGAACCGACTCCCAGAACTCCGGACGTGTGCGGCGCAGTGAGTCGCAGCCATG
TTCCTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGCGGCGGGGGAGGCGGGGGCCTGGGTGGGGGCCTGGGAAATGT
GCTTGGAGGCCTGATCAGCGGGGCCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTGGAGGCGGCGGTGGCG
GTGGAACGGCCATGCGCATCCTAGGCGGAGTCATCAGCGCCATCAGCGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCG
CCCCCACGCACACATTACTCCAACATTGAGGCCAACGAGAGTGAGGAGGTCCGGCAGTTCCGGAGACTCTTTGCCCAGCT
GGCTGGAGATGACATGGAGGTCAGCGCCACAGAACTCATGAACATTCTCAATAAGGTTGTGACACGACACCCTGATCTGA
AGACTGATGGTTTTGGCATTGACACATGTCGCAGCATGGTGGCCGTGATGGATAGCGACACCACAGGCAAGCTGGGCTTT
GAGGAATTCAAGTACTTGTGGAACAACATCAAAAGGTGGCAGGCCATATACAAACAGTTCGACACTGACCGATCAGGGAC
CATTTGCAGTAGTGAACTCCCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCTCTATAACATGATCATCC
GACGCTACTCAGATGAAAGTGGGAACATGGATTTTGACAACTTCATCAGCTGCTTGGTCAGGCTGGACGCCATGTTCCGT
GCCTTCAAATCTCTTGACAAAGATGGCACTGGACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCTGACTATGTATTC
CTGAACTGGAGCCCCAGACCCGCCCCCTCACTGCCTTGCTATAGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGAT
CCTGTCTGCAGTCACATCTTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAGCTTCTCAA
CATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCC
ATTCCCACCAGGCCCTGCACACACCCACTCCGTAACCTCTCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGATGCCTCC
ATGCCCCGAGGGCCCTCTCTCAGTTCTGGGAGGATGACTCCAGTCCCTGCACGCCCTGGCACACCCTTCACGGTTGCTAC
CCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGCTCCCAGCCTGCCAGGC
CCAGGAGGAAATAAACATGCCCCAGTTGCTGATCTCTAAAAAAAAAAAAAAA
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Primary source |
RefSeq : NM_001003962.1 (GI:51599150)
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Name |
Calpain, small subunit 1 (CAPNS1), transcript variant 2
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Type of transcript |
mRNA
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Organism |
Homo sapiens
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Length |
1489 nt
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Map |
19q13.12
|
Location |
Chromosome 19 (NC_000019.9) strand : +
36630917...36631058 | 36631901...36632121 | 36633201...36633234 | 36633553...36633642 |
36633810...36633867 | 36633965...36634029 | 36636707...36636775 | 36636877...36636955 |
36637097...36637213 | 36640479...36640537 | 36640714...36641254 |
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Exon(s) |
Start |
End |
Length |
is coding |
Exon 1
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1
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142
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142
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1
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Exon 2b
|
143
|
363
|
221
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1
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Exon 3
|
364
|
397
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34
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1
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Exon 4
|
398
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487
|
90
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1
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Exon 5
|
488
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545
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58
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1
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Exon 6
|
546
|
610
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65
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1
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Exon 7
|
611
|
679
|
69
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1
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Exon 8
|
680
|
758
|
79
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1
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Exon 9
|
759
|
875
|
117
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1
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Exon 10
|
876
|
934
|
59
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1
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Exon 11
|
935
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1475
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541
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1
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Primary source |
NCBI : CCDS12489
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Nucleotide |
CAPNS1, mRNA isoform 2[NM_001003962.1] : 155...961
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Length |
807
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Location |
Chromosome 19 (NC_000019.9) strand : +
36631913...36632121 | 36633201...36633234 | 36633553...36633642 | 36633810...36633867 |
36633965...36634029 | 36636707...36636775 | 36636877...36636955 | 36637097...36637213 |
36640479...36640537 | 36640714...36640740 |
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Start codon |
1
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Translation |
NP_001003962.1 |
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1 |
CGGGCGACAG |
CAGGGCCGCG |
GTGCAGTGTC |
CGACCCGAGA |
GTTGCGGCCT |
GAGTCACCGG |
CCCCGCCCTC |
CGGAGCCGGA |
|
81 |
CGCTGCGGGA |
GGCCCGGGAG |
CGGCAGTGGA |
ACCGACTCCC |
AGAACTCCGG |
ACGTGTGCGG |
CGTGAGTCGC |
AGCCATGTTC |
|
161 |
CTGGTTAACT |
CGTTCTTGAA |
GGGCGGCGGC |
GGCGGCGGCG |
GGGGAGGCGG |
GGGCCTGGGT |
GGGGGCCTGG |
GAAATGTGCT |
|
241 |
TGGAGGCCTG |
ATCAGCGGGG |
CCGGGGGCGG |
CGGCGGCGGC |
GGCGGCGGCG |
GCGGCGGTGG |
TGGAGGCGGC |
GGTGGCGGTG |
|
321 |
GAACGGCCAT |
GCGCATCCTA |
GGCGGAGTCA |
TCAGCGCCAT |
CAGCGAGGCG |
GCTGCGCAGT |
ACAACCCGGA |
GCCCCCGCCC |
|
401 |
CCACGCACAC |
ATTACTCCAA |
CATTGAGGCC |
AACGAGAGTG |
AGGAGGTCCG |
GCAGTTCCGG |
AGACTCTTTG |
CCCAGCTGGC |
|
481 |
TGGAGATGAC |
ATGGAGGTCA |
GCGCCACAGA |
ACTCATGAAC |
ATTCTCAATA |
AGGTTGTGAC |
ACGACACCCT |
GATCTGAAGA |
|
561 |
CTGATGGTTT |
TGGCATTGAC |
ACATGTCGCA |
GCATGGTGGC |
CGTGATGGAT |
AGCGACACCA |
CAGGCAAGCT |
GGGCTTTGAG |
|
641 |
GAATTCAAGT |
ACTTGTGGAA |
CAACATCAAA |
AGGTGGCAGG |
CCATATACAA |
ACAGTTCGAC |
ACTGACCGAT |
CAGGGACCAT |
|
721 |
TTGCAGTAGT |
GAACTCCCAG |
GTGCCTTTGA |
GGCAGCAGGG |
TTCCACCTGA |
ATGAGCATCT |
CTATAACATG |
ATCATCCGAC |
|
801 |
GCTACTCAGA |
TGAAAGTGGG |
AACATGGATT |
TTGACAACTT |
CATCAGCTGC |
TTGGTCAGGC |
TGGACGCCAT |
GTTCCGTGCC |
|
881 |
TTCAAATCTC |
TTGACAAAGA |
TGGCACTGGA |
CAAATCCAGG |
TGAACATCCA |
GGAGTGGCTG |
CAGCTGACTA |
TGTATTCCTG |
|
961 |
AACTGGAGCC |
CCAGACCCGC |
CCCCTCACTG |
CCTTGCTATA |
GGAGTCACCT |
GGAGCCTCGG |
TCTCTCCCAG |
GGCCGATCCT |
|
1041 |
GTCTGCAGTC |
ACATCTTTGT |
GGGGCCTGCT |
GACCCACAAG |
CTTTTGTTCT |
CTCAGTACTT |
GTTACCCAGC |
TTCTCAACAT |
|
1121 |
CCAGGGCCCA |
ATTTGCCCTG |
CCTGGAGTTC |
CCCCTGGCTC |
TAGGACACTC |
TAACAAGCTC |
TGTCCACGGG |
TCTCCCCATT |
|
1201 |
CCCACCAGGC |
CCTGCACACA |
CCCACTCCGT |
AACCTCTCCC |
CTGTACCTGT |
GCCAAGCCTA |
GCACTTGTGA |
TGCCTCCATG |
|
1281 |
CCCCGAGGGC |
CCTCTCTCAG |
TTCTGGGAGG |
ATGACTCCAG |
TCCCTGCACG |
CCCTGGCACA |
CCCTTCACGG |
TTGCTACCCA |
|
1361 |
GGCGGCCAAG |
CTCCAGACCG |
TGCCAGACCC |
AGGTGCCCCA |
GTGCCTTTGT |
CTATATTCTG |
CTCCCAGCCT |
GCCAGGCCCA |
|
1441 |
GGAGGAAATA |
AACATGCCCC |
AGTTGCTGAT |
CTCTAAAAAA |
AAAAAAAAA |
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>gi|51599150|ref|NM_001003962.1|Calpain, small subunit 1 (CAPNS1), transcript variant 2
CGGGCGACAGCAGGGCCGCGGTGCAGTGTCCGACCCGAGAGTTGCGGCCTGAGTCACCGGCCCCGCCCTCCGGAGCCGGA
CGCTGCGGGAGGCCCGGGAGCGGCAGTGGAACCGACTCCCAGAACTCCGGACGTGTGCGGCGTGAGTCGCAGCCATGTTC
CTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGCGGCGGGGGAGGCGGGGGCCTGGGTGGGGGCCTGGGAAATGTGCT
TGGAGGCCTGATCAGCGGGGCCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTGGAGGCGGCGGTGGCGGTG
GAACGGCCATGCGCATCCTAGGCGGAGTCATCAGCGCCATCAGCGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGCCC
CCACGCACACATTACTCCAACATTGAGGCCAACGAGAGTGAGGAGGTCCGGCAGTTCCGGAGACTCTTTGCCCAGCTGGC
TGGAGATGACATGGAGGTCAGCGCCACAGAACTCATGAACATTCTCAATAAGGTTGTGACACGACACCCTGATCTGAAGA
CTGATGGTTTTGGCATTGACACATGTCGCAGCATGGTGGCCGTGATGGATAGCGACACCACAGGCAAGCTGGGCTTTGAG
GAATTCAAGTACTTGTGGAACAACATCAAAAGGTGGCAGGCCATATACAAACAGTTCGACACTGACCGATCAGGGACCAT
TTGCAGTAGTGAACTCCCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCTCTATAACATGATCATCCGAC
GCTACTCAGATGAAAGTGGGAACATGGATTTTGACAACTTCATCAGCTGCTTGGTCAGGCTGGACGCCATGTTCCGTGCC
TTCAAATCTCTTGACAAAGATGGCACTGGACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCTGACTATGTATTCCTG
AACTGGAGCCCCAGACCCGCCCCCTCACTGCCTTGCTATAGGAGTCACCTGGAGCCTCGGTCTCTCCCAGGGCCGATCCT
GTCTGCAGTCACATCTTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTCTCAGTACTTGTTACCCAGCTTCTCAACAT
CCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAACAAGCTCTGTCCACGGGTCTCCCCATT
CCCACCAGGCCCTGCACACACCCACTCCGTAACCTCTCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGATGCCTCCATG
CCCCGAGGGCCCTCTCTCAGTTCTGGGAGGATGACTCCAGTCCCTGCACGCCCTGGCACACCCTTCACGGTTGCTACCCA
GGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTATATTCTGCTCCCAGCCTGCCAGGCCCA
GGAGGAAATAAACATGCCCCAGTTGCTGATCTCTAAAAAAAAAAAAAAA
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Exon number |
2a
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Length |
224 nt
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Location |
Chromosome 19 (NC_000019.9) : 36631898...36632121 (+)
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Is part of |
CAPNS1, mRNA isoform 1
(NM_001749.2)
|
Sequence |
Show
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CAGTGAGTCGCAGCCATGTTCCTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGCGGCGGGGGAGGCGGGGGCCTGGG
TGGGGGCCTGGGAAATGTGCTTGGAGGCCTGATCAGCGGGGCCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTG
GTGGAGGCGGCGGTGGCGGTGGAACGGCCATGCGCATCCTAGGCGGAGTCATCAGCGCCATCAG
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Exon number |
2b
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Length |
221 nt
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Location |
Chromosome 19 (NC_000019.9) : 36631901...36632121 (+)
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Is part of |
CAPNS1, mRNA isoform 2
(NM_001003962.1)
|
Sequence |
Show
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TGAGTCGCAGCCATGTTCCTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGCGGCGGGGGAGGCGGGGGCCTGGGTGG
GGGCCTGGGAAATGTGCTTGGAGGCCTGATCAGCGGGGCCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTG
GAGGCGGCGGTGGCGGTGGAACGGCCATGCGCATCCTAGGCGGAGTCATCAGCGCCATCAG
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Exon number |
11
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Length |
541 nt
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Location |
Chromosome 19 (NC_000019.9) : 36640714...36641254 (+)
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Is part of |
CAPNS1, mRNA isoform 2
(NM_001003962.1)
CAPNS1, mRNA isoform 1
(NM_001749.2)
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Sequence |
Show
|
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TGGCTGCAGCTGACTATGTATTCCTGAACTGGAGCCCCAGACCCGCCCCCTCACTGCCTTGCTATAGGAGTCACCTGGAG
CCTCGGTCTCTCCCAGGGCCGATCCTGTCTGCAGTCACATCTTTGTGGGGCCTGCTGACCCACAAGCTTTTGTTCTCTCA
GTACTTGTTACCCAGCTTCTCAACATCCAGGGCCCAATTTGCCCTGCCTGGAGTTCCCCCTGGCTCTAGGACACTCTAAC
AAGCTCTGTCCACGGGTCTCCCCATTCCCACCAGGCCCTGCACACACCCACTCCGTAACCTCTCCCCTGTACCTGTGCCA
AGCCTAGCACTTGTGATGCCTCCATGCCCCGAGGGCCCTCTCTCAGTTCTGGGAGGATGACTCCAGTCCCTGCACGCCCT
GGCACACCCTTCACGGTTGCTACCCAGGCGGCCAAGCTCCAGACCGTGCCAGACCCAGGTGCCCCAGTGCCTTTGTCTAT
ATTCTGCTCCCAGCCTGCCAGGCCCAGGAGGAAATAAACATGCCCCAGTTGCTGATCTCTA
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Primary source |
Uniprot : P04632
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Name |
Calpain small subunit 1
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Alternative name(s) |
Calcium-activated neutral proteinase small subunit Calcium-dependent protease small subunit Calcium-dependent protease small subunit 1 Calpain regulatory subunit
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Synonym(s) |
CANP small subunit CDPS CSS1
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Organism |
Homo sapiens
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Length |
268 aa
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Protein existence |
---
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General annotation (Comments)
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top
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Cofactor
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Calcium (By similarity).
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Domain
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The contact of the 5th EF-hand domain from each monomer allows the formation of the homodimer and also appears to mediate the contact between the large catalytic subunit and small regulatory subunit for the formation of the heterodimer (By similarity).
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Function
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Regulatory subunit of the calcium-regulated non- lysosomal thiol-protease which catalyzes limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction.
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Similarity
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Contains 5 EF-hand domains.
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Subcellular location
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Cytoplasm (By similarity). Cell membrane (By similarity). Note=Translocates to the plasma membrane upon calcium binding (By similarity).
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Subunit
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Homodimer or heterodimer of a large (catalytic) and a small (regulatory) subunit. In presence of calcium, the heterodimer dissociates (By similarity).
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Biological process
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positive regulation of cell proliferation [GO:0008284]
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Cellular component
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nucleus [GO:0005634]
cytoplasm [GO:0005737]
plasma membrane [GO:0005886]
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Molecular function
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calcium-dependent cysteine-type endopeptidase activity [GO:0004198]
calcium ion binding [GO:0005509]
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Alternative product(s)
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top
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Feature key |
Position
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Length
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Description
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Feature identifier
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Region |
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Calcium binding
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108 - 119
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12
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1 (By similarity)
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P04632-CA_BIND-108
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Calcium binding
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152 - 163
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12
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2 (By similarity)
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P04632-CA_BIND-152
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Calcium binding
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182 - 193
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12
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3 (By similarity)
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P04632-CA_BIND-182
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Compositional bias
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1 - 66
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66
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Gly-rich (hydrophobic)
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P04632-COMPBIAS-1
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Compositional bias
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10 - 26
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17
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Poly-Gly
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P04632-COMPBIAS-10
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Compositional bias
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35 - 56
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22
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Poly-Gly
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P04632-COMPBIAS-35
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Compositional bias
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78 - 83
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6
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Poly-Pro
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P04632-COMPBIAS-78
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Domain
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91 - 125
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35
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EF-hand 1; atypical
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P04632-DOMAIN-91
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Domain
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139 - 172
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34
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EF-hand 2
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P04632-DOMAIN-139
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Domain
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169 - 204
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36
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EF-hand 3
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P04632-DOMAIN-169
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Domain
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205 - 233
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29
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EF-hand 4
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P04632-DOMAIN-205
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Domain
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234 - 268
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35
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EF-hand 5
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P04632-DOMAIN-234
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Natural variations |
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Natural variant site
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224 - 224
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1
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M -> V (in dbSNP:rs17878750)
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VAR_021089
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Amino acid modifications |
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Modified residue
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1 - 1
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1
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N-acetylmethionine
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P04632-MOD_RES-1
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Modified residue
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179 - 179
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1
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N6-acetyllysine
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P04632-MOD_RES-179
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1 |
MFLVNSFLKG |
GGGGGGGGGG |
LGGGLGNVLG |
GLISGAGGGG |
GGGGGGGGGG |
GGGGGGTAMR |
ILGGVISAIS |
EAAAQYNPEP |
|
81 |
PPPRTHYSNI |
EANESEEVRQ |
FRRLFAQLAG |
DDMEVSATEL |
MNILNKVVTR |
HPDLKTDGFG |
IDTCRSMVAV |
MDSDTTGKLG |
|
161 |
FEEFKYLWNN |
IKRWQAIYKQ |
FDTDRSGTIC |
SSELPGAFEA |
AGFHLNEHLY |
NMIIRRYSDE |
SGNMDFDNFI |
SCLVRLDAMF |
|
241 |
RAFKSLDKDG |
TGQIQVNIQE |
WLQLTMYS |
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>sp|P04632|CPNS1_human Calpain small subunit 1
MFLVNSFLKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGGVISAISEAAAQYNPEP
PPPRTHYSNIEANESEEVRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLG
FEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDESGNMDFDNFISCLVRLDAMF
RAFKSLDKDGTGQIQVNIQEWLQLTMYS
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