(MAP1LC3A) microtubule-associated protein 1 light chain 3 alpha [Homo sapiens] |
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Gene
Transcript(s)
Exon(s)
Protein(s)
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Accession
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10520
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Official symbol
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MAP1LC3A
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Official name
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microtubule-associated protein 1 light chain 3 alpha
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Gene type
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gene with protein product
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Organism
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Homo sapiens
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Location
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Chromosome 20 (NC_000020.10) : 33134691...33148148 (+)
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Map
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20cen-q13
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Length
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13458 nt
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NM_032514.2
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MAP1LC3A, mRNA isoform 1
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NM_181509.1
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MAP1LC3A, mRNA isoform 2
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Accession
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Name
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Organism
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Length
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Q9H492
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Microtubule-associated proteins 1A/1B light chain 3A
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Homo sapiens
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121 aa
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Synonyms |
MAP1BLC3; MAP1ALC3; LC3A; LC3
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Alternative name(s) |
microtubule-associated proteins 1A/1B light chain 3; MAP1 light chain 3-like protein 1; MAP1A/1B light chain 3 A; MAP1A/MAP1B LC3 A
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Summary |
MAP1A and MAP1B are microtubule-associated proteins which mediate the physical interactions between microtubules and components of the cytoskeleton. MAP1A and MAP1B each consist of a heavy chain subunit and multiple light chain subunits. The protein encoded by this gene is one of the light chain subunits and can associate with either MAP1A or MAP1B. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq].
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Related Articles in PubMed
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Go to ensembl
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1 |
AGGTGCAAGG |
AGAAAGGATT |
TTGAGGAGGG |
GTGAGTCACC |
AGAACACATT |
TGTTTGCTGC |
GGAGAGATCG |
TAAGGGGCCT |
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81 |
CGGAGCAAGT |
CCATGGGGCG |
TGAGGAGGGC |
TGGCGTCCTG |
CGCACAGTGG |
AAGGACTGGC |
CTTAGGAACA |
GGGACAGTGA |
|
161 |
TTCCACTCAG |
CATAGCCAGG |
GAGCGGCCCA |
GATGGCAGGG |
CAAGGTCTCT |
GTGGAGTGAG |
GGCAGCAGGG |
AAGGTGCCTC |
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241 |
GCAGGAGAGG |
AGAGAAAACA |
TACACTTCCC |
TGGGGACGCG |
GGCGGGGAGT |
TTGACGGGTT |
CGGCAGGTGG |
CCCTTTTGCA |
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321 |
GCATCTTTTT |
CAGCCGGGGG |
TGCAGCAGTC |
ACCATACAGC |
TGAACTCGGC |
CAGGTTAAGG |
CGGCAGAAGA |
AAGAGGGAGT |
|
401 |
TGGGACTTTT |
GGAAGTAATT |
ATGATGGCTG |
TGGAGTCTGT |
GCTGGGTGAG |
GAAGGGAAGT |
GACTGGATAG |
AGGGTGGCAG |
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481 |
TGGAATTTTT |
TTTTTAATTA |
AAATTTTTTT |
CTTCCCCAAC |
CGCTCCCCAC |
CTTTTTTTTT |
TTTTTTTTTT |
TTTAAATAGA |
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561 |
GACAGGGTCT |
GGTTATGTTG |
CTGATATGGT |
CTGGCTCTGC |
CCCACCCAAA |
ATCTCATCTT |
GAATTATAAT |
CCCCATAATC |
|
641 |
CCCAGGTGTC |
AAGGGAGAGC |
CCAGGTGGAG |
GTGATTGAAT |
CATGGGGGCG |
GTTCCCCCAT |
GCTCTTCCCG |
TGATAGTTCT |
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721 |
CACAAGAGCT |
GATGGTTTGG |
TAGGTCCTCC |
TGCGTTCATT |
CTCTCTCCTG |
TCGCCTAGCG |
AAGAAGGTGC |
CTGCTTCCCC |
|
801 |
GTCACCTTCC |
TCCAGGATTG |
TGAGTTTCCT |
GAGGCCTCCC |
CAGCCATGCA |
GAACTGTGCC |
TCAGTTAAAC |
CTCTTTTCTT |
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881 |
TGTAAATTAC |
TCAGGCTCGG |
GCAGTTCTTC |
ACAGCAGTGT |
GAGAATGGAC |
AAATAGTTTC |
CCAGGCTGGT |
CTTGAGCTCC |
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961 |
TGCGGCCTCC |
CTAAACGCTG |
GGATTGCAGG |
TGTGAGCCAC |
CGCACCTGGC |
CAGAATGAAA |
CTTTGGAAGG |
GGCTGATTGT |
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1041 |
TCAGATAGGC |
GGGGGTCAGT |
GTGCTCGGCC |
TTGCTTCTGC |
AGGGGAGGCA |
CACTGGTGAG |
GTGCCCTCTA |
GGGCAGACGA |
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1121 |
GGGAGGGGGG |
TTCCCGGAGC |
AGTGACGGTG |
GAGACAGGTG |
GGACGACACA |
GATGGGCTTG |
AGAGGACTCA |
GGACTGCAAT |
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1201 |
GGCAGGTGAG |
GGGGAGTCCA |
CCTGGGCCTG |
GACCAGGTGA |
TGGGATGAGA |
AGGGAGGGGG |
CGATTAGCTA |
GAGGCACAGG |
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1281 |
CTTGGGGAAA |
GAGATGACTT |
CCTTTGGACG |
TGTTGAGTTC |
GGAGGCAGCC |
TTTGTTCCAG |
AGACAGAGCC |
TGGACCTGAC |
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1361 |
AGCTGGAAGC |
CAAACTGGAG |
GTGGGGATTG |
TACGTCACTC |
ATAGTGGAGG |
CACTGGTGGG |
TGTGGAGAGA |
ACCCAGGACC |
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1441 |
CCATGAGTGG |
CTGGAGGCTG |
CGAAGGCCGC |
GGGGAGCCAA |
CCTCCCCAGG |
TGACCAGACC |
GCTCCAAGGG |
CTTGAGGTCA |
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1521 |
CGGAGGGAGA |
AGGGTGGCAG |
CCCCGGCCCT |
CTCACTCAGG |
GAGGTGGAGT |
TAGAGCTGGA |
GAGGCCTGAG |
CACGCCCCTG |
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1601 |
GCTCAAGAGG |
AGGACAGATA |
TGCGGGTGAG |
GCCCGGAGGA |
AGGGAATGGC |
CAGGTCTGAG |
GCCCTGCATG |
GGCTGTGGGG |
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1681 |
TTGGTGTTCT |
CAGCCTCCAC |
TTTTCCAGTG |
AAAGCAGAGG |
ATCTGTGGGG |
AGCAAGGTGG |
GGCAGTGTGA |
GCTCGAGGCC |
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1761 |
GGAGGACCCC |
TGAGTGGGTC |
TCAGTCCCTA |
CAATCTTTGG |
AGTGTTCCCC |
TTCGCTGCCT |
TTTTTTTTTT |
TTTTTAAAGA |
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1841 |
TGGAGTCTTG |
CTCTTGTCTC |
CCAGGCTGGA |
GTGCAATGGC |
ACAATCTCGA |
CTCACTAAAA |
CCTCCGCCTC |
CCGGGTTCAA |
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1921 |
GCAATTCTCC |
TGCCTCAGTC |
TCCCGAGTAG |
CTGAGACTAC |
AGGCGCCCGC |
CACCATGCCC |
AGCTAATTTT |
TGTGTTTTTA |
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2001 |
GTAGATACAG |
GGTTTCACCA |
TGTTGGCCAA |
GCTGGTCTTG |
AACTCCTGAC |
CTCAGGTGAT |
CCACCCACCT |
CGGCCTCCCG |
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2081 |
AAGTGCTGGG |
ATTACAGGTG |
TGAGCCACCA |
TGCCCGGCCC |
CACTTTGCTT |
TTTTGGTTGT |
GGTTTTTTGG |
TTTTGTTTTT |
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2161 |
GTTTTGATAG |
TCTCTATCAC |
CCAGGCTAGA |
GGGCAGTGGT |
GCAATCTTGG |
CTCACTGCAA |
CCTCCGCCTC |
CCGGGTTCAA |
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2241 |
GTGATTCTTC |
TGCCTCAGCT |
TCCCAAGTAG |
CTGGGATTGC |
AGGCATGCAC |
CATCATGCCT |
GGCTAATTTT |
TGTATTTTTA |
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2321 |
GTAGAGAAGG |
GGTTTCGCCG |
TGTTGGCCAG |
GCTGGTCTAG |
AACTCTTGAC |
CTCAGGTGAT |
CAGACCACCT |
TGGCCTCCCA |
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2401 |
AAGTGCTGGG |
ATTACAGGCA |
CGAGCCACCA |
TGGTCAGCCT |
TCACTTTGAG |
TCTGTAAACG |
GGAACTGCCA |
ATCCTTCCTC |
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2481 |
GGAGATAATG |
ACCCTGACTC |
AGACTTCAGC |
CCACGTGTCC |
TCCCGATATG |
AGGCCCATTT |
TTACGAGTTC |
ATCACCTTAA |
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2561 |
ACGAGGCGCC |
AAGTCACAGC |
GGTGTTGATG |
CAGGGCAGGT |
TCTTTGCCTG |
GCTCAGGAAG |
GAATTCAAGA |
ACCAGCCGGT |
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2641 |
GGTAGAAGAA |
AACAGCTTGA |
TTGATGGGGT |
GGCACGTTAC |
GGCTGTGACT |
GGCCCCGCCA |
TGGGCAGTGT |
GCTGAGAGTA |
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2721 |
GCAGCCCAGG |
GACAGATCTG |
AATCCGTGCT |
TATTCCCATT |
TTTAATGACA |
TCCTAATTCA |
GGGGGCGGGT |
TATTCAGAAA |
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2801 |
TAGCTAGAAA |
ATGGGCGGTA |
ACTTTTGAGT |
GTTGCCATGG |
CCAGAGGTGG |
TAACTTCCAG |
GTGTTGCCAT |
GGCAATGGTA |
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2881 |
AACTGCCATG |
GCACTGGTGG |
GCGTGTCTTA |
GGGAGAGGTG |
ATTTCAGCAC |
TTCTGGTTCA |
GCCAGTCTTC |
AATCTCGTCC |
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2961 |
AGAGTCAGTC |
CCTCCTGCCT |
CCTGCCTCCG |
TGCTGATTGC |
AGGCCCTGTT |
TCCCCCAGGA |
CTCCATGGCT |
TCCGAGTTGC |
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3041 |
TGACTGACCC |
TCCACCTCAG |
AGGTAGTTCT |
GACACTGTCT |
CAGTTTTGCA |
GATGAAGATG |
AGATTCTTCA |
GTTCTCCATG |
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3121 |
TGGAAAAGCA |
GCTGTGGACC |
CAGGTCTGTC |
TGGCCCGCCT |
GCCGTTGTGT |
GAAGGAGCTC |
AGGGCCTATG |
GTCTGTCCAC |
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3201 |
ACTCGCGGTC |
ATCAGTGGCC |
AAGCAGGCCA |
GGGTTGCTCC |
GCCCGTGTGC |
CAGGCCGGCC |
AAGGCCAGTT |
CTCCACTTTT |
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3281 |
TCTCAGGCCC |
ATGGGTCCAA |
GTCCGAAGCC |
ACAGAACGGC |
AGGAATGAGG |
GGTGGGAGCA |
GAGCAGTCGA |
GGGTGCGCTT |
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3361 |
GACCGTGGCT |
GAGACCCCCT |
GAGCAGAAAC |
GACTCCCCCA |
ACCTCTGCTG |
ATCCTCCTAG |
CACCCAGCAG |
CAGTGCTTGG |
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3441 |
CACAGACTCT |
GTCCCTGCGC |
ATGGTCTAGA |
GGGGGAGATA |
GACCTTCTAG |
ATGGCAAACG |
GCATGGAGAG |
ATGACTGTGG |
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3521 |
GGGCCTGGGG |
GAGGGGTCAC |
TTATCCAAAT |
AATAATTACT |
GAGCACCCAC |
CATGTGCCAC |
ACTCTAAGTC |
CTGGGGTGTA |
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3601 |
GCAGGAACCA |
AGCATATGCA |
GAACTGCCCT |
TCAAGGGCTT |
GCACTTTAGT |
GAGAAGGAAA |
TAAAATTTTA |
TAATATTAAA |
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3681 |
TGTAAAACCA |
CAGTGAGATA |
CCACTACACA |
CCCGCCAAAA |
TGGCGAAACG |
AAAATGAACA |
CCACCAAACG |
GTGGCAAGGA |
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3761 |
GGCAGCGCAC |
CTGGAACTCC |
CGCACATCGC |
TGATGGGAGC |
ACAAAATGGA |
ACAGCACTGA |
AGAGAGGCCT |
GGCCACTCCT |
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3841 |
CAAACACACA |
CCTGCCCCCA |
AAGCCAGCAT |
ATCTCCTATT |
CGTCCAAGTG |
AAACAAAAGA |
ACATATCCCT |
TAAAGTATAA |
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3921 |
TTAAAAATAT |
ATATATATCC |
ACACAAACAC |
TGTCACAGAA |
ACGTTCAGAG |
CAGTTTTATT |
CACAATCACC |
AAAAGCTGGA |
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4001 |
AACAGCCCAG |
GCATCCATCA |
ATGGAAAAAC |
TGCTACATCC |
ATCCATGGGA |
ACCTACTTGA |
TAGTTTAAAG |
AAATGGCCTA |
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4081 |
CTTGGGCACG |
GTGGCTCATG |
CTTGTAATCT |
CAGCACTTTA |
GGAGGCTGAA |
ACCGGTAGAT |
CAGGAGGTCA |
GGAGTTTGAG |
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4161 |
ACCAGCCTGG |
GCAATATAGT |
GAAACCCTGT |
CTCTACTAAA |
AATACAAAAA |
AAAAAATTAG |
CCAGGCCTGG |
TGGCATGCTC |
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4241 |
CCGTAATCCC |
AGCTACTCAG |
GAGACCAAGG |
CAGGAGAATC |
ACTTGAACCC |
AGAAGGTGGA |
GGTTGCAGTG |
AGCCAAGATC |
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4321 |
TTGCCACTGC |
ACTTCAGCCT |
GGGTGACAGA |
CTCTGTCTCA |
AAAAAAAAAA |
AAGCCTACTG |
ATACCTGCAA |
CAACATGGGT |
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4401 |
AAGCCTCAAA |
ACTTCATGTT |
GAATTAAACC |
AGAGGCACAA |
GAATACATGC |
CGTATGATTC |
CATCTAGAAG |
AATTTCTAGA |
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4481 |
CCAGGCCAGA |
ATATGGTGAG |
AAATGAGAAT |
AATGATTGCC |
TCCATGGGGC |
GTGCAGGTAG |
ACTGGTGAGG |
CCCAAGGAAC |
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4561 |
CTTCCAAGGG |
GAACGCTGTC |
CTTTTTTTTT |
TTTTTTTTTT |
TTTGAGTCTT |
GCTGTGTTGC |
CCACAGTCAG |
GCTGGAGTGC |
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4641 |
AGTGGCACGA |
TTTCGGCTCA |
CTGCAACCTC |
TGCCTCCTGG |
GTTCAAGTGA |
TTCTCCGATT |
CAGGAGGTAG |
CTGGGATTAC |
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4721 |
AGGTGCCTGC |
CATCACGCCT |
GGCTAATTTT |
TTCTATCTTT |
AGTAGAGATG |
GGGTTTCACC |
ATGTTGGCCA |
GGCTGGTCTT |
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4801 |
GAACTCTTGA |
CTTCAGGTGA |
TCTGCCCTTG |
GCCTCCCGAA |
GTGCTGGGAT |
TACAGGCGTG |
AGCCACCGCG |
CCTGGCCATG |
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4881 |
TTCTCTATCT |
TGAAAGGGGT |
TTGGGTCACA |
TTAGTGAGTG |
TACTTCTCAG |
ACTCACCAAA |
GAGTACACTT |
GACACCTCTG |
|
4961 |
CATTTCATTG |
TTTGTGAATT |
TTACCCTGAA |
AGAAAAAAAA |
CCAAATACTG |
ACATGAATGT |
GAAAGACTGA |
GGAGAAAGTG |
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5041 |
AACAGATGTC |
TGCAACTTAC |
TCTGAAATTC |
AACAAAAAGG |
GAAAATGGAC |
AGAGACGTAA |
TAAAGCAGAT |
GAAGCCAACT |
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5121 |
GCTTTTGAGA |
TGGAATCTCA |
AAATCTCTGT |
CACCCAGGCT |
AGAGTGCAGT |
GTGCGATCTC |
GGCTCACTGC |
AATCTCCACC |
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5201 |
TTCCAGGTTG |
AAGCGATTCT |
CCTGCCTCAG |
CCTCCCCAGT |
GGCTGGGATT |
ACAGGCGAGT |
ACTGCCACAC |
CCAGCTAATT |
|
5281 |
TTTGTATTTT |
TAGTAGAGAC |
GGGGTTTCGC |
CAGGTTGGCC |
ACGCTGGTCT |
CAAATTCCTG |
ACCTCAGGTG |
ATCCACCTGC |
|
5361 |
CTTGGCCTTT |
GAAAAGTGCT |
TGGGTTACAG |
GCGTGAGCCT |
CTGGACCTGG |
CAGAGCCAAC |
TGTTAATGGC |
AGAATGTAAC |
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5441 |
TGGGTGTAAG |
AGGGACCACT |
ACCATTATTT |
CAAGTGTGTT |
TGAACGCTTT |
CATAATGAAA |
TGCCCAGAAA |
AATTATACAG |
|
5521 |
CATATTGGAA |
GGCCTCCCTG |
AGGAGACACT |
TGAACCAAAA |
CTCGAGGTGA |
GGGTGTGAGG |
GACACAGAGA |
TCCCGGGGAA |
|
5601 |
GGATGTTCCA |
GGCAAAGGCC |
CTGGGGCATG |
AGCCTGACAG |
GGATTCCTAG |
AGTAGCCAGG |
AGGCCAGAGG |
AGTAGCGGGG |
|
5681 |
AGGCAGATCC |
CACGGCCTCC |
TGGGCCACCA |
TCCATCAGCC |
CTTGGCTCTT |
ACTCTAAGAG |
GGGTATGTGG |
GGACAGGACA |
|
5761 |
GCTGTGGTCA |
CTGTCCTGAG |
AGCGGACTGA |
AGGAGGCAAG |
GCCAGGGCAG |
GAAAACCAGC |
AAGGAGACAA |
TAGCAGCAGT |
|
5841 |
TCTGCAAGAT |
GTGGTCGGGG |
CTCTGGCCCT |
GGTGGCAGTG |
GCGGCCGTGG |
TGTGCCATGG |
TCAGATTCTG |
GAGAATCTTG |
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5921 |
AAGGTGGAAC |
AGACAGGATT |
TGAGGATGGA |
CTGGGTGTGG |
AGCAGGAGTG |
GTGGAAGGGG |
GTGGTAAAGG |
AAAGGAAGGA |
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6001 |
GTCAAGAATG |
ACTCTGAGGA |
GGCCGGGCAC |
AATGGCTCAC |
ACCTATAATC |
CCAGCACTTT |
GGAAGCCCAA |
GGCAGGTGGA |
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6081 |
TCGCCTGAGG |
CCAGGAGTTC |
GAGACCAGCC |
TGGCCAACAT |
GGTGAAACCC |
CGTCTCTACC |
AAAAATACAA |
AAATTAGCTG |
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6161 |
GGCATGGTGA |
CGGGTGCCTG |
TAATCCCAGC |
CACTCGGGAG |
GCTGAGGCAG |
GAGAATCGCT |
TGAAGGTGGG |
TGGCGGAGGT |
|
6241 |
TGCGGTACGC |
CAATATTGTG |
CCGTTGCACT |
CCCTACCTAG |
GTGACGAGCG |
AAATTGCATC |
TCAAAAATGA |
AAAATAAATA |
|
6321 |
AATGAAAAAG |
GTTTTTGGCC |
TGAAAAGGGG |
AGACAAAAGA |
TTCCAACTGG |
AGCACATTTT |
AGGGGAAGAT |
CATGGGTTTG |
|
6401 |
TTGTGCACAG |
GTCAAGTTTG |
AGATGTCTGT |
CAGACATTCA |
AGCAGACACA |
TGAAGTAGAG |
GTCAGGCCAC |
TGGATTCAGG |
|
6481 |
GGTGATGGGG |
CAGGGGAGGG |
ACTGAAGGGC |
GAGTCAGCCC |
TGCTGACTGT |
CAGGCAGGGG |
CAGAGCTCAC |
AGCTTGGGAC |
|
6561 |
TTGGGGCCCT |
CCTCCTCCAC |
GTTGGCCTCA |
GTTCAGGGCT |
GAGTCTGACA |
AAAGACAGGT |
GTAATCACTT |
TCCAAGGCTG |
|
6641 |
ACCCAGTTCT |
TTGGCTGCTC |
TCAGTGGGCC |
TGGTCACATT |
TAATCTTCTG |
TGGCACTGTG |
TGTGTGAGGT |
TTGTCCAGTT |
|
6721 |
TGACACACAG |
CTCTGGATCA |
AAAGTCGGCA |
AACTAAGGCC |
CTCAGTTAAG |
TCTGTTTGTT |
TTGGCAAATA |
AAGTTTTATC |
|
6801 |
CAGATCCAGC |
CAATCTCATT |
TAGGCTGTCT |
AAGGCCACTA |
CAGCAGAACC |
AGGTGGCTGC |
CAGAGACCAC |
ATGGCCTGCA |
|
6881 |
AAGCCTAAAA |
TATTTACTGT |
CTGGCCCTTT |
AAGGGAAACA |
TTTGCCGACT |
CCTCTCCATC |
TTTCATTAAA |
CAGGGTGTGG |
|
6961 |
TTCTGTTATA |
GGAACACACA |
GCAAGCTATT |
GAATAAGACA |
TTTAGGTGGT |
TCCCAACTTT |
TTGCTATTAT |
GAAAATGTTA |
|
7041 |
CAATAAACAT |
TCTTACCCTT |
GTTTCCCTGG |
GCTCCTGGGC |
ACACACAGTG |
GAATTCCTGG |
TGTGTAGGAA |
AGACATGGGC |
|
7121 |
ATCTTCAGTT |
TGGGTCAATT |
TTGCCAAATT |
GCTCTCCAGT |
GTAGCTGAGG |
TCAGTTACAC |
TCCCAGCAGC |
AGTGGAAAGA |
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7201 |
GCCCATCTTT |
CCACGTTCCT |
CTAAACTTAT |
TACCTATCAG |
GTGTCCTCAG |
CCTTCAGTAG |
TTACCAGTCT |
TTCACTGTGT |
|
7281 |
GTAGATTCTC |
TTGGATTTCC |
TGGCTGTGAG |
TGACAGGTTT |
GCTCTTTTTT |
TGTCTTGGTG |
CTCTGGACCC |
CTGTACAATA |
|
7361 |
CTGAATTGTC |
TTTACTAGCC |
ATTTGTTCCT |
GGCTTTTAAG |
AGAATATTTC |
ATGTTTTACC |
ACATAGTATA |
GTGTTTTACC |
|
7441 |
TTTAAGTACA |
TGTTTACTAT |
ACGTTGGGTT |
TTTTTTTTTT |
TTTTTTTTTT |
TTTTTTTTTT |
TTTTTTTAGA |
CAAACTCTCG |
|
7521 |
CTCTGTCACC |
AGGCTGGAGT |
GCGGTGGCGC |
GATCTCGGTT |
CACTGCAACC |
TCCGCCTCCC |
AGGTTCAAGT |
GATTCTCCTG |
|
7601 |
CCTCAGCCTC |
CCAAGTAGCT |
GGGACTACAG |
GCATGCACCA |
CCACGCCCAG |
CTAATTTTTG |
TATTTTTAGT |
AGAGACGGGG |
|
7681 |
TTTCACCATG |
TTGGCCAGGA |
TGGTCTCAAT |
CTCTTAACCT |
CATGATCCGC |
CTGCCTTGGC |
CGCCCAAAGT |
GCTGGGATTA |
|
7761 |
CAGGCATGAG |
ACACCGCGCC |
CGGCCTGTTT |
TTGTTTTTTG |
AGATGGGGTC |
TCTCGCTCTG |
TCGCCAGGCT |
GGAGTGTAGT |
|
7841 |
GACACAATCT |
TGGCTCACTA |
CAACCTCCAC |
CTCCCTGGTT |
CAAGCAATTC |
TCATGCCTCA |
GCCTCCCACG |
TAGCTGGACT |
|
7921 |
ACAGACACGT |
GCCACCATAC |
CCAGCTAATT |
TTTTTGTATT |
TTGTAATTTT |
TGTATTTTGT |
ATTTTTTGTA |
TTTTTTTTTT |
|
8001 |
TTGTAGAGAT |
GGGGTTTCAC |
CATATTGCCC |
AGGCTGGTCT |
ACAACTCCTG |
GACTCAAGTG |
ATCTGCCTGC |
CTTGGCCTCC |
|
8081 |
CCAAGTGCTG |
TGATTACAGG |
TGTGGGCCAC |
CACACCTGGC |
CTATTTTTTG |
TTGTTGTTGT |
TTTTTGTTTG |
TTTTCAGCAT |
|
8161 |
TTTTTGTTGT |
TTTTCTGAGA |
AAGGGCCTCT |
GTCACTCAAA |
CGATCCTTCC |
TGAGTAGTTG |
GGACTATAGG |
TGTGTGCCAC |
|
8241 |
CAAAGCCAGC |
GAATTTTCTT |
ATTTTTTTTT |
TTTTTTGAGA |
CAGAGTCTCA |
CTCTTGTCAC |
GCAGGCTGGA |
GTGCAGTGGC |
|
8321 |
ATGATCTTGG |
CTCACTGAAA |
CCTCTGCCTC |
CCGGATTCAA |
GCAATTCTTG |
TGCCTCAGCC |
TCCCAAGTAG |
CTGAGATTAC |
|
8401 |
AGAATGCACC |
ACCACACCCA |
GCTAACTTCT |
GTATTTTTAG |
TAGAGACAGG |
GTTTTGCCAT |
GTTGGCCAGG |
CTGGTCTCGA |
|
8481 |
ACTCCTGGCC |
TCAAGTGATC |
TGCCCACCTC |
AGCCTCCCAA |
AGTGTTGGGA |
TTACAGGCGT |
GAGCCACTGT |
GCCTGGCCTA |
|
8561 |
ATTTTCTCAT |
TTTTGTAGAG |
ACGGGGTCTC |
ACTATGTGGC |
CCAGGCTGGT |
CTCAAACTTC |
TGGGCTCAAA |
TGATTTTCCA |
|
8641 |
ACCTGGGCCT |
CCCAAAGTGC |
TAGGATTACA |
CTATTACTCC |
TTCTTAAATT |
TCTTTGAAAC |
TCTGCTCATG |
GATTTTCTGT |
|
8721 |
ATTTATTATC |
TAAGTAATAC |
ATCTATGTAA |
TAAGGCTATA |
AATCTGATTT |
TTTTTTTTTT |
TAAAGAAATG |
GATCTTATTT |
|
8801 |
TGTCACCGAG |
GCTGGAATGC |
AGAGCTGCAA |
TCACAGCTCA |
CTGCAGCCTT |
GAACTCTTGG |
GCTCAAGCAA |
TTCTCCAGTC |
|
8881 |
TGGGCCCCCC |
AAAGTGCTGG |
GATTACAGGT |
ATGAACCACC |
ACACCTGGCC |
TGCCATGGCC |
CCCCTCCCAA |
GTTTTCTTTC |
|
8961 |
TTTTTTTTTT |
TTTTTTGATG |
GAGTCTCGCT |
CTGTCGCCCA |
GGCTGGAGTG |
CAGTGGCGCG |
ATCTCCATTT |
ACTGCAAGCT |
|
9041 |
CCGCCTCCCA |
GGTTCGAGCC |
ATTCTCCTGC |
CTCAGCCTCC |
CGAGTAGCTG |
GAACTACAGG |
CGCCCGCCAC |
CACGCCCAGC |
|
9121 |
TAATTTTTTG |
TATTTTTAGT |
AGAGACGGGG |
TTTCACCATG |
TTAGCCAGGA |
TGGTCTCGAT |
CTCCTGACCT |
CGTGATCCGC |
|
9201 |
CTGCCTTGGC |
CTCCCAAAGT |
GCTGGGATTA |
CAGGCGTGAG |
CCACTGCGCC |
CGGCCACCAA |
GTTTTCTTAG |
CATATGTATC |
|
9281 |
CTCATTTTTT |
GTTTGAACTA |
AATAATTTTT |
ATTTATATAT |
GACTTCATAT |
TTAGAATAGG |
TTTAAATTTC |
CACACAGCTG |
|
9361 |
GAGCTTACGC |
GGCTTTTGTC |
TGTGGCCAAA |
GAATATGGTT |
GAAACTGATT |
TGATATCTGT |
TGAGATTTGT |
CGTGCACCCT |
|
9441 |
AGTAGTTGGG |
TCATTTTTGT |
AAATGTTCCT |
TGTGTGATTG |
AAAATAATGT |
GTTGGTCTCA |
CACAGGTCTG |
AAATTTAAAT |
|
9521 |
TTTAAAAGTT |
AAAAAACTAA |
CTGTCAGGTT |
TTCTATTGGG |
GTTCATTGAT |
CTTGATTAGT |
AACTGTATTA |
ACATCCTCTA |
|
9601 |
TGTCCTTTTT |
TTTTTGGTTG |
TTTGGTTTAT |
TAGTTACTCA |
AAGAGGTCTT |
ATGTCTCCCT |
ATGATGGAGG |
ACCTGGCAAT |
|
9681 |
TTCTCCTTGT |
GTTCTTAATA |
TATTTTCAGC |
CTCTTTTTTT |
TTTTTTTCGA |
GACAGAGTCT |
CACTCTGTTG |
CCCAGGCTGG |
|
9761 |
AGGGCAGTGG |
CGCAATCTCA |
GCTCACTGCA |
ACCTCCGCCT |
AGCAGGTTCA |
AGCAATTCTT |
GTGCCTCAGC |
CACCTGAGTA |
|
9841 |
GTTGGGATGA |
CAGGCGTGCA |
CCACCACGCC |
CAGCTAGCTA |
ATCTTTGTAT |
TTTTAGTAGA |
GACAGAGTTT |
TGCCATGTTG |
|
9921 |
GCCAGGCTGG |
TCTTGAATTC |
CCAGCCTCTA |
GTGATCCACC |
CACCTCGGCC |
TCCCAAAGTG |
CTGGGATTAC |
TGGCATGAGC |
|
10001 |
CACTGCGCCT |
GGCCTATTTT |
CAGCCTTAAA |
AACAAAAACC |
CTGGAACATA |
GAAGTTCAGA |
ACTTTCCTCT |
CTTCACAGAG |
|
10081 |
TTCCTCCTCG |
CATCATTTCA |
TGTTGATCCT |
CTTATCCCCA |
GTGTCTTCTG |
CCTGAAGGCC |
TATTTTGTCT |
GAGTTTTCTA |
|
10161 |
TAGGTACATC |
TTTTGGTTAG |
TTTTTCTCTA |
GTACACCTTT |
TCCCATCGTT |
TTACTTTTTG |
GTGCCCTTAG |
GTTTTAAATT |
|
10241 |
TCCTCTTGTA |
AATAGCATAG |
AGCTGCATCT |
TATTTTTTCT |
TGGCCAATCT |
GGTCATCTGT |
GTTTTAAGAG |
GTGAATGTAA |
|
10321 |
ACCACATTTT |
CTACCTCTGG |
TTTTGTACTA |
TATATTTACC |
ATCCCTTTTA |
CTTTGCTTCC |
TTTTTCTCCC |
TTTCTGCCTT |
|
10401 |
CCATTATAGT |
TTTAATACCC |
ATCACTACCC |
TTTTCTCTGC |
ATTGGCAGTT |
ATAGTTCCGT |
TTGTATTCTT |
TTGGTGATCC |
|
10481 |
TCTTAAATAT |
CTGAAATACA |
CACCTGACTT |
TACAAAGCCA |
GACAATGCTC |
AGTCTCTTTA |
ACCCCCTCTC |
AAATTGCCCT |
|
10561 |
CTCAGTCTTC |
CATGTTCTTG |
TGTCTCATGC |
ATCTTGTTTC |
TGTGGCCCAC |
AAATTAATCA |
TTATTATTCA |
TATTGCATAT |
|
10641 |
TAAATGCTTG |
TTTAGATTCA |
CATGTTTACC |
AATTTGCTCA |
CCATTTTTCC |
ATCTAATTTC |
TTCCTTTTGG |
GTTCCATGTC |
|
10721 |
CTTGTTACTA |
AACTACATTC |
TTTAAAAATT |
ATTTCGGCGG |
CCAGGCGTGG |
TGGCTCACAC |
CTGTAATCCC |
AGCACTTTGG |
|
10801 |
GAGGCCGAGG |
CGAGTGGATC |
ACGAGGTCAG |
GAGATCGAGA |
CCATCCTGGC |
CAACATGGTG |
AAACTCCATC |
TCTACTAAAA |
|
10881 |
ATACAATAAT |
TAGCTGGGGG |
TGGTGGCAGG |
CGCCTGTAAT |
CCCAGCTACT |
GAGGAGGCTG |
ACTGAGGCAG |
GAGAATCGCT |
|
10961 |
TGAACCCGGG |
AGGCAGAGGT |
TGCAGTGAGC |
TGAGATCGCA |
CCACTGCACC |
CCAGCCTGGC |
GACAGAACGA |
GACTTCGTCC |
|
11041 |
CCCTCCCCCC |
TCCCCCAAAA |
AAATGTTGAT |
CTTCAGTCTG |
CGCATTCTGC |
TCTGGATTTT |
AAGCATCATT |
TCTGGCAGCT |
|
11121 |
CTTTTTCAGG |
AACTGTCTCT |
GCAGGTCTTT |
CAGTGTTCGC |
CTCTGGAGCT |
CTGCTCGGGC |
CCGCGAGTTC |
TCCTGGCGTT |
|
11201 |
GCCATCTGTG |
CCCTTTTCCT |
TATTCCCCAT |
CACCTGTCTC |
TCTGGTGAGC |
TGCTTCCGAT |
CAGCCTCCAG |
GTCCACGATT |
|
11281 |
TCTCTTCTGT |
TGTCCTTTTC |
TGCCTTCTCA |
CCTCATCCTC |
TGAGACCTGA |
ATTTCGATGG |
CTCTACTTTT |
CAATTATATT |
|
11361 |
ATTCTTTTTC |
AAACCTGGGC |
GTTCATTTCT |
AGCATCCTGT |
TCTATCCTGT |
GTCTGACTGT |
GCCTCCCGCA |
CCTTCTCCCT |
|
11441 |
TCTCTCGCCC |
TAAGCCCCGT |
GAAGGCGCCG |
GGCCTTTGGC |
TCCGGCTGTT |
TCCCACGGCG |
CCCAGAACCG |
CGTCAGTCCT |
|
11521 |
GACACAGACT |
CGGTGAGGGC |
GGGAAGTGGT |
GCCGTGGGGC |
TGCAGCCTGG |
CCCGCCCGCT |
CCATCGGCCT |
AGGGCGGCCC |
|
11601 |
CACCGCCCTC |
CGGGCCTTAC |
CTTGAGTTCG |
GGCTGCGGGA |
GAAGCTCCCG |
CGCTGCCCAT |
GACGTCACGG |
GACTGTGACG |
|
11681 |
CGCCCAGAAG |
CCCCGCCCCT |
CGCGTCCCGG |
TCCGCGGACC |
CAGGCTCTCT |
GCGCCGTGAC |
GTCACGGGTC |
CGGGCGGGCG |
|
11761 |
GGTTGTGCGT |
CGGCCCAATG |
GGAGCGGCGC |
ACTGGCCTCC |
CCTTTAAGGA |
ATGTTGTGAC |
CTGACGTCAC |
CGGGCGAGTT |
|
11841 |
ACCTCCCGCA |
GCCGCAGCCG |
CCGTGCTCAG |
CGCGAGCCCC |
GGAGCCCTTG |
AGCGCGAGGC |
GCGGAGCCCC |
CGGAGCCCCC |
|
11921 |
AAACCGCAGA |
CACATCCCCG |
CGCCCCAGAG |
CCCCGGCCTG |
CGCGCCCAGC |
CGGGCCCGCG |
CGATGCCCTC |
AGACCGGCCT |
|
12001 |
TTCAAGCAGC |
GGCGGAGCTT |
CGGTGAGGCC |
CGGCAGGCGA |
GCTGCGAGCT |
CTGGGGCAGG |
GGTGCCGGCC |
GACCCCGACT |
|
12081 |
GCCGCAGGTG |
ACGTCAGCCC |
CGTGACGTCA |
GGCTCTGGCT |
GGACCCTCGG |
GCTGGGACCA |
GCTCCGGCCT |
GGGCGGGGGC |
|
12161 |
TGCCCGCTTC |
CCCACCGCGA |
TAGGTGCCAG |
GGGCTGTGGG |
GCCTGATGGC |
CCCGGGGGTG |
GGGGCTGGAG |
CTGGGGCGTG |
|
12241 |
GCCGGGGGCC |
GCCCCTCCGG |
GACAGGCGGG |
GCGGACCTGG |
GCCGGCCCGA |
CCCGGCCTCA |
CGGTCTGGCC |
GCTGTCCGCA |
|
12321 |
GCCGACCGCT |
GTAAGGAGGT |
ACAGCAGATC |
CGCGACCAGC |
ACCCCAGCAA |
AATCCCGGTG |
AGTCCCGCAC |
CCCCAGCCCT |
|
12401 |
GCCCCGCCCC |
CGCCTCGCGC |
GTTCCCGACA |
CGACCCCCTG |
CCCGCCCGCC |
CTGCTCCCAG |
GTGATCATCG |
AGCGCTACAA |
|
12481 |
GGGTGAGAAG |
CAGCTGCCCG |
TCCTGGACAA |
GACCAAGTTT |
TTGGTCCCGG |
ACCATGTCAA |
CATGAGCGAG |
TTGGTCAAGA |
|
12561 |
TCATCCGGTG |
CGTGGGCAGC |
CGCCGCCAGG |
AGGTGGCTAG |
GGTCGGGAGG |
GGAGCCGGGT |
TCCCGCCGAG |
AAGGGGTGGG |
|
12641 |
AGTGGGGTCA |
GGGGTGATGG |
GACCGGGCGG |
TGGGCCCCTG |
TTCTGGGGTG |
GCTGGAAAGG |
TCAAGGTCGG |
GGCTGCAGTC |
|
12721 |
GGTGTTGGGT |
CAGAGGTGAC |
AGCTGGGGTG |
AGAATGGGTG |
TGAAAGGCTG |
GGAATCATTC |
TGGGGGTCAG |
GGCTATGTCC |
|
12801 |
GTCCCGCAGC |
CAAGCCCCTC |
ACAGCTGCAT |
ACTCTCCCGC |
CGGCTGCAGG |
CGCCGCCTGC |
AGCTGAACCC |
CACGCAGGCC |
|
12881 |
TTCTTCCTGC |
TGGTGAACCA |
GCACAGCATG |
GTGAGTGTGT |
CCACGCCCAT |
CGCGGACATC |
TACGAGCAGG |
AGAAAGACGA |
|
12961 |
GGACGGCTTC |
CTCTATATGG |
TCTACGCCTC |
CCAGGAAACC |
TTCGGCTTCT |
GAGCCAGCAG |
TAGGGGGGCT |
CGGCCTGGGA |
|
13041 |
GTCGGGCGGC |
CCCGGTCAGG |
CCCTGCCCAG |
AGAGCTCCTG |
GTTCCTGAAC |
TGAGCTGCCT |
CTACCGTGGT |
GGGCTGGGCA |
|
13121 |
GGCATGTGCC |
CCCCTAGTCA |
GAGGGCACCA |
ACCCACCTAC |
TCTGCCCCTG |
GGTGGATCCT |
GGGCCGGTCG |
TGTTAGGGTT |
|
13201 |
GTCCCTCTGG |
GTGCTGGCTG |
GTGGGATGGG |
GGAGGGTGGG |
GAGCAGCTCC |
CAGCACCCCT |
GCTGTGTGGT |
TCATCTTTTT |
|
13281 |
TTTAGGCCCC |
TGCCTGTCTG |
CCCATCTGCC |
CCTCACCCAC |
CCGAGGCTCT |
GCCCACCGCC |
TGGACCTGCC |
CACCCCTGAA |
|
13361 |
AGACTGGCCC |
CTGGCTCCCC |
GCCCCTCGGT |
CTCCACGTGG |
TGTATGGATC |
TGTGGTCATT |
GTCCCTCTGC |
AGAATAAAGA |
|
13441 |
TTGCTCAGGC |
CTGCCTGG |
|
|
|
|
|
|
|
|
|
|
|
|
>ref|Gene_ID:84557|MAP1LC3A|NC_000020.10:33134691...33148148 (+)
AGGTGCAAGGAGAAAGGATTTTGAGGAGGGGTGAGTCACCAGAACACATTTGTTTGCTGCGGAGAGATCGTAAGGGGCCT
CGGAGCAAGTCCATGGGGCGTGAGGAGGGCTGGCGTCCTGCGCACAGTGGAAGGACTGGCCTTAGGAACAGGGACAGTGA
TTCCACTCAGCATAGCCAGGGAGCGGCCCAGATGGCAGGGCAAGGTCTCTGTGGAGTGAGGGCAGCAGGGAAGGTGCCTC
GCAGGAGAGGAGAGAAAACATACACTTCCCTGGGGACGCGGGCGGGGAGTTTGACGGGTTCGGCAGGTGGCCCTTTTGCA
GCATCTTTTTCAGCCGGGGGTGCAGCAGTCACCATACAGCTGAACTCGGCCAGGTTAAGGCGGCAGAAGAAAGAGGGAGT
TGGGACTTTTGGAAGTAATTATGATGGCTGTGGAGTCTGTGCTGGGTGAGGAAGGGAAGTGACTGGATAGAGGGTGGCAG
TGGAATTTTTTTTTTAATTAAAATTTTTTTCTTCCCCAACCGCTCCCCACCTTTTTTTTTTTTTTTTTTTTTTAAATAGA
GACAGGGTCTGGTTATGTTGCTGATATGGTCTGGCTCTGCCCCACCCAAAATCTCATCTTGAATTATAATCCCCATAATC
CCCAGGTGTCAAGGGAGAGCCCAGGTGGAGGTGATTGAATCATGGGGGCGGTTCCCCCATGCTCTTCCCGTGATAGTTCT
CACAAGAGCTGATGGTTTGGTAGGTCCTCCTGCGTTCATTCTCTCTCCTGTCGCCTAGCGAAGAAGGTGCCTGCTTCCCC
GTCACCTTCCTCCAGGATTGTGAGTTTCCTGAGGCCTCCCCAGCCATGCAGAACTGTGCCTCAGTTAAACCTCTTTTCTT
TGTAAATTACTCAGGCTCGGGCAGTTCTTCACAGCAGTGTGAGAATGGACAAATAGTTTCCCAGGCTGGTCTTGAGCTCC
TGCGGCCTCCCTAAACGCTGGGATTGCAGGTGTGAGCCACCGCACCTGGCCAGAATGAAACTTTGGAAGGGGCTGATTGT
TCAGATAGGCGGGGGTCAGTGTGCTCGGCCTTGCTTCTGCAGGGGAGGCACACTGGTGAGGTGCCCTCTAGGGCAGACGA
GGGAGGGGGGTTCCCGGAGCAGTGACGGTGGAGACAGGTGGGACGACACAGATGGGCTTGAGAGGACTCAGGACTGCAAT
GGCAGGTGAGGGGGAGTCCACCTGGGCCTGGACCAGGTGATGGGATGAGAAGGGAGGGGGCGATTAGCTAGAGGCACAGG
CTTGGGGAAAGAGATGACTTCCTTTGGACGTGTTGAGTTCGGAGGCAGCCTTTGTTCCAGAGACAGAGCCTGGACCTGAC
AGCTGGAAGCCAAACTGGAGGTGGGGATTGTACGTCACTCATAGTGGAGGCACTGGTGGGTGTGGAGAGAACCCAGGACC
CCATGAGTGGCTGGAGGCTGCGAAGGCCGCGGGGAGCCAACCTCCCCAGGTGACCAGACCGCTCCAAGGGCTTGAGGTCA
CGGAGGGAGAAGGGTGGCAGCCCCGGCCCTCTCACTCAGGGAGGTGGAGTTAGAGCTGGAGAGGCCTGAGCACGCCCCTG
GCTCAAGAGGAGGACAGATATGCGGGTGAGGCCCGGAGGAAGGGAATGGCCAGGTCTGAGGCCCTGCATGGGCTGTGGGG
TTGGTGTTCTCAGCCTCCACTTTTCCAGTGAAAGCAGAGGATCTGTGGGGAGCAAGGTGGGGCAGTGTGAGCTCGAGGCC
GGAGGACCCCTGAGTGGGTCTCAGTCCCTACAATCTTTGGAGTGTTCCCCTTCGCTGCCTTTTTTTTTTTTTTTTAAAGA
TGGAGTCTTGCTCTTGTCTCCCAGGCTGGAGTGCAATGGCACAATCTCGACTCACTAAAACCTCCGCCTCCCGGGTTCAA
GCAATTCTCCTGCCTCAGTCTCCCGAGTAGCTGAGACTACAGGCGCCCGCCACCATGCCCAGCTAATTTTTGTGTTTTTA
GTAGATACAGGGTTTCACCATGTTGGCCAAGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCG
AAGTGCTGGGATTACAGGTGTGAGCCACCATGCCCGGCCCCACTTTGCTTTTTTGGTTGTGGTTTTTTGGTTTTGTTTTT
GTTTTGATAGTCTCTATCACCCAGGCTAGAGGGCAGTGGTGCAATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAA
GTGATTCTTCTGCCTCAGCTTCCCAAGTAGCTGGGATTGCAGGCATGCACCATCATGCCTGGCTAATTTTTGTATTTTTA
GTAGAGAAGGGGTTTCGCCGTGTTGGCCAGGCTGGTCTAGAACTCTTGACCTCAGGTGATCAGACCACCTTGGCCTCCCA
AAGTGCTGGGATTACAGGCACGAGCCACCATGGTCAGCCTTCACTTTGAGTCTGTAAACGGGAACTGCCAATCCTTCCTC
GGAGATAATGACCCTGACTCAGACTTCAGCCCACGTGTCCTCCCGATATGAGGCCCATTTTTACGAGTTCATCACCTTAA
ACGAGGCGCCAAGTCACAGCGGTGTTGATGCAGGGCAGGTTCTTTGCCTGGCTCAGGAAGGAATTCAAGAACCAGCCGGT
GGTAGAAGAAAACAGCTTGATTGATGGGGTGGCACGTTACGGCTGTGACTGGCCCCGCCATGGGCAGTGTGCTGAGAGTA
GCAGCCCAGGGACAGATCTGAATCCGTGCTTATTCCCATTTTTAATGACATCCTAATTCAGGGGGCGGGTTATTCAGAAA
TAGCTAGAAAATGGGCGGTAACTTTTGAGTGTTGCCATGGCCAGAGGTGGTAACTTCCAGGTGTTGCCATGGCAATGGTA
AACTGCCATGGCACTGGTGGGCGTGTCTTAGGGAGAGGTGATTTCAGCACTTCTGGTTCAGCCAGTCTTCAATCTCGTCC
AGAGTCAGTCCCTCCTGCCTCCTGCCTCCGTGCTGATTGCAGGCCCTGTTTCCCCCAGGACTCCATGGCTTCCGAGTTGC
TGACTGACCCTCCACCTCAGAGGTAGTTCTGACACTGTCTCAGTTTTGCAGATGAAGATGAGATTCTTCAGTTCTCCATG
TGGAAAAGCAGCTGTGGACCCAGGTCTGTCTGGCCCGCCTGCCGTTGTGTGAAGGAGCTCAGGGCCTATGGTCTGTCCAC
ACTCGCGGTCATCAGTGGCCAAGCAGGCCAGGGTTGCTCCGCCCGTGTGCCAGGCCGGCCAAGGCCAGTTCTCCACTTTT
TCTCAGGCCCATGGGTCCAAGTCCGAAGCCACAGAACGGCAGGAATGAGGGGTGGGAGCAGAGCAGTCGAGGGTGCGCTT
GACCGTGGCTGAGACCCCCTGAGCAGAAACGACTCCCCCAACCTCTGCTGATCCTCCTAGCACCCAGCAGCAGTGCTTGG
CACAGACTCTGTCCCTGCGCATGGTCTAGAGGGGGAGATAGACCTTCTAGATGGCAAACGGCATGGAGAGATGACTGTGG
GGGCCTGGGGGAGGGGTCACTTATCCAAATAATAATTACTGAGCACCCACCATGTGCCACACTCTAAGTCCTGGGGTGTA
GCAGGAACCAAGCATATGCAGAACTGCCCTTCAAGGGCTTGCACTTTAGTGAGAAGGAAATAAAATTTTATAATATTAAA
TGTAAAACCACAGTGAGATACCACTACACACCCGCCAAAATGGCGAAACGAAAATGAACACCACCAAACGGTGGCAAGGA
GGCAGCGCACCTGGAACTCCCGCACATCGCTGATGGGAGCACAAAATGGAACAGCACTGAAGAGAGGCCTGGCCACTCCT
CAAACACACACCTGCCCCCAAAGCCAGCATATCTCCTATTCGTCCAAGTGAAACAAAAGAACATATCCCTTAAAGTATAA
TTAAAAATATATATATATCCACACAAACACTGTCACAGAAACGTTCAGAGCAGTTTTATTCACAATCACCAAAAGCTGGA
AACAGCCCAGGCATCCATCAATGGAAAAACTGCTACATCCATCCATGGGAACCTACTTGATAGTTTAAAGAAATGGCCTA
CTTGGGCACGGTGGCTCATGCTTGTAATCTCAGCACTTTAGGAGGCTGAAACCGGTAGATCAGGAGGTCAGGAGTTTGAG
ACCAGCCTGGGCAATATAGTGAAACCCTGTCTCTACTAAAAATACAAAAAAAAAAATTAGCCAGGCCTGGTGGCATGCTC
CCGTAATCCCAGCTACTCAGGAGACCAAGGCAGGAGAATCACTTGAACCCAGAAGGTGGAGGTTGCAGTGAGCCAAGATC
TTGCCACTGCACTTCAGCCTGGGTGACAGACTCTGTCTCAAAAAAAAAAAAAGCCTACTGATACCTGCAACAACATGGGT
AAGCCTCAAAACTTCATGTTGAATTAAACCAGAGGCACAAGAATACATGCCGTATGATTCCATCTAGAAGAATTTCTAGA
CCAGGCCAGAATATGGTGAGAAATGAGAATAATGATTGCCTCCATGGGGCGTGCAGGTAGACTGGTGAGGCCCAAGGAAC
CTTCCAAGGGGAACGCTGTCCTTTTTTTTTTTTTTTTTTTTTTGAGTCTTGCTGTGTTGCCCACAGTCAGGCTGGAGTGC
AGTGGCACGATTTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCGATTCAGGAGGTAGCTGGGATTAC
AGGTGCCTGCCATCACGCCTGGCTAATTTTTTCTATCTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTT
GAACTCTTGACTTCAGGTGATCTGCCCTTGGCCTCCCGAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCCATG
TTCTCTATCTTGAAAGGGGTTTGGGTCACATTAGTGAGTGTACTTCTCAGACTCACCAAAGAGTACACTTGACACCTCTG
CATTTCATTGTTTGTGAATTTTACCCTGAAAGAAAAAAAACCAAATACTGACATGAATGTGAAAGACTGAGGAGAAAGTG
AACAGATGTCTGCAACTTACTCTGAAATTCAACAAAAAGGGAAAATGGACAGAGACGTAATAAAGCAGATGAAGCCAACT
GCTTTTGAGATGGAATCTCAAAATCTCTGTCACCCAGGCTAGAGTGCAGTGTGCGATCTCGGCTCACTGCAATCTCCACC
TTCCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCCCAGTGGCTGGGATTACAGGCGAGTACTGCCACACCCAGCTAATT
TTTGTATTTTTAGTAGAGACGGGGTTTCGCCAGGTTGGCCACGCTGGTCTCAAATTCCTGACCTCAGGTGATCCACCTGC
CTTGGCCTTTGAAAAGTGCTTGGGTTACAGGCGTGAGCCTCTGGACCTGGCAGAGCCAACTGTTAATGGCAGAATGTAAC
TGGGTGTAAGAGGGACCACTACCATTATTTCAAGTGTGTTTGAACGCTTTCATAATGAAATGCCCAGAAAAATTATACAG
CATATTGGAAGGCCTCCCTGAGGAGACACTTGAACCAAAACTCGAGGTGAGGGTGTGAGGGACACAGAGATCCCGGGGAA
GGATGTTCCAGGCAAAGGCCCTGGGGCATGAGCCTGACAGGGATTCCTAGAGTAGCCAGGAGGCCAGAGGAGTAGCGGGG
AGGCAGATCCCACGGCCTCCTGGGCCACCATCCATCAGCCCTTGGCTCTTACTCTAAGAGGGGTATGTGGGGACAGGACA
GCTGTGGTCACTGTCCTGAGAGCGGACTGAAGGAGGCAAGGCCAGGGCAGGAAAACCAGCAAGGAGACAATAGCAGCAGT
TCTGCAAGATGTGGTCGGGGCTCTGGCCCTGGTGGCAGTGGCGGCCGTGGTGTGCCATGGTCAGATTCTGGAGAATCTTG
AAGGTGGAACAGACAGGATTTGAGGATGGACTGGGTGTGGAGCAGGAGTGGTGGAAGGGGGTGGTAAAGGAAAGGAAGGA
GTCAAGAATGACTCTGAGGAGGCCGGGCACAATGGCTCACACCTATAATCCCAGCACTTTGGAAGCCCAAGGCAGGTGGA
TCGCCTGAGGCCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACCAAAAATACAAAAATTAGCTG
GGCATGGTGACGGGTGCCTGTAATCCCAGCCACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAAGGTGGGTGGCGGAGGT
TGCGGTACGCCAATATTGTGCCGTTGCACTCCCTACCTAGGTGACGAGCGAAATTGCATCTCAAAAATGAAAAATAAATA
AATGAAAAAGGTTTTTGGCCTGAAAAGGGGAGACAAAAGATTCCAACTGGAGCACATTTTAGGGGAAGATCATGGGTTTG
TTGTGCACAGGTCAAGTTTGAGATGTCTGTCAGACATTCAAGCAGACACATGAAGTAGAGGTCAGGCCACTGGATTCAGG
GGTGATGGGGCAGGGGAGGGACTGAAGGGCGAGTCAGCCCTGCTGACTGTCAGGCAGGGGCAGAGCTCACAGCTTGGGAC
TTGGGGCCCTCCTCCTCCACGTTGGCCTCAGTTCAGGGCTGAGTCTGACAAAAGACAGGTGTAATCACTTTCCAAGGCTG
ACCCAGTTCTTTGGCTGCTCTCAGTGGGCCTGGTCACATTTAATCTTCTGTGGCACTGTGTGTGTGAGGTTTGTCCAGTT
TGACACACAGCTCTGGATCAAAAGTCGGCAAACTAAGGCCCTCAGTTAAGTCTGTTTGTTTTGGCAAATAAAGTTTTATC
CAGATCCAGCCAATCTCATTTAGGCTGTCTAAGGCCACTACAGCAGAACCAGGTGGCTGCCAGAGACCACATGGCCTGCA
AAGCCTAAAATATTTACTGTCTGGCCCTTTAAGGGAAACATTTGCCGACTCCTCTCCATCTTTCATTAAACAGGGTGTGG
TTCTGTTATAGGAACACACAGCAAGCTATTGAATAAGACATTTAGGTGGTTCCCAACTTTTTGCTATTATGAAAATGTTA
CAATAAACATTCTTACCCTTGTTTCCCTGGGCTCCTGGGCACACACAGTGGAATTCCTGGTGTGTAGGAAAGACATGGGC
ATCTTCAGTTTGGGTCAATTTTGCCAAATTGCTCTCCAGTGTAGCTGAGGTCAGTTACACTCCCAGCAGCAGTGGAAAGA
GCCCATCTTTCCACGTTCCTCTAAACTTATTACCTATCAGGTGTCCTCAGCCTTCAGTAGTTACCAGTCTTTCACTGTGT
GTAGATTCTCTTGGATTTCCTGGCTGTGAGTGACAGGTTTGCTCTTTTTTTGTCTTGGTGCTCTGGACCCCTGTACAATA
CTGAATTGTCTTTACTAGCCATTTGTTCCTGGCTTTTAAGAGAATATTTCATGTTTTACCACATAGTATAGTGTTTTACC
TTTAAGTACATGTTTACTATACGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGACAAACTCTCG
CTCTGTCACCAGGCTGGAGTGCGGTGGCGCGATCTCGGTTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTG
CCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGG
TTTCACCATGTTGGCCAGGATGGTCTCAATCTCTTAACCTCATGATCCGCCTGCCTTGGCCGCCCAAAGTGCTGGGATTA
CAGGCATGAGACACCGCGCCCGGCCTGTTTTTGTTTTTTGAGATGGGGTCTCTCGCTCTGTCGCCAGGCTGGAGTGTAGT
GACACAATCTTGGCTCACTACAACCTCCACCTCCCTGGTTCAAGCAATTCTCATGCCTCAGCCTCCCACGTAGCTGGACT
ACAGACACGTGCCACCATACCCAGCTAATTTTTTTGTATTTTGTAATTTTTGTATTTTGTATTTTTTGTATTTTTTTTTT
TTGTAGAGATGGGGTTTCACCATATTGCCCAGGCTGGTCTACAACTCCTGGACTCAAGTGATCTGCCTGCCTTGGCCTCC
CCAAGTGCTGTGATTACAGGTGTGGGCCACCACACCTGGCCTATTTTTTGTTGTTGTTGTTTTTTGTTTGTTTTCAGCAT
TTTTTGTTGTTTTTCTGAGAAAGGGCCTCTGTCACTCAAACGATCCTTCCTGAGTAGTTGGGACTATAGGTGTGTGCCAC
CAAAGCCAGCGAATTTTCTTATTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTTGTCACGCAGGCTGGAGTGCAGTGGC
ATGATCTTGGCTCACTGAAACCTCTGCCTCCCGGATTCAAGCAATTCTTGTGCCTCAGCCTCCCAAGTAGCTGAGATTAC
AGAATGCACCACCACACCCAGCTAACTTCTGTATTTTTAGTAGAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGA
ACTCCTGGCCTCAAGTGATCTGCCCACCTCAGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACTGTGCCTGGCCTA
ATTTTCTCATTTTTGTAGAGACGGGGTCTCACTATGTGGCCCAGGCTGGTCTCAAACTTCTGGGCTCAAATGATTTTCCA
ACCTGGGCCTCCCAAAGTGCTAGGATTACACTATTACTCCTTCTTAAATTTCTTTGAAACTCTGCTCATGGATTTTCTGT
ATTTATTATCTAAGTAATACATCTATGTAATAAGGCTATAAATCTGATTTTTTTTTTTTTTAAAGAAATGGATCTTATTT
TGTCACCGAGGCTGGAATGCAGAGCTGCAATCACAGCTCACTGCAGCCTTGAACTCTTGGGCTCAAGCAATTCTCCAGTC
TGGGCCCCCCAAAGTGCTGGGATTACAGGTATGAACCACCACACCTGGCCTGCCATGGCCCCCCTCCCAAGTTTTCTTTC
TTTTTTTTTTTTTTTTGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCCATTTACTGCAAGCT
CCGCCTCCCAGGTTCGAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAACTACAGGCGCCCGCCACCACGCCCAGC
TAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGC
CTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCACCAAGTTTTCTTAGCATATGTATC
CTCATTTTTTGTTTGAACTAAATAATTTTTATTTATATATGACTTCATATTTAGAATAGGTTTAAATTTCCACACAGCTG
GAGCTTACGCGGCTTTTGTCTGTGGCCAAAGAATATGGTTGAAACTGATTTGATATCTGTTGAGATTTGTCGTGCACCCT
AGTAGTTGGGTCATTTTTGTAAATGTTCCTTGTGTGATTGAAAATAATGTGTTGGTCTCACACAGGTCTGAAATTTAAAT
TTTAAAAGTTAAAAAACTAACTGTCAGGTTTTCTATTGGGGTTCATTGATCTTGATTAGTAACTGTATTAACATCCTCTA
TGTCCTTTTTTTTTTGGTTGTTTGGTTTATTAGTTACTCAAAGAGGTCTTATGTCTCCCTATGATGGAGGACCTGGCAAT
TTCTCCTTGTGTTCTTAATATATTTTCAGCCTCTTTTTTTTTTTTTTCGAGACAGAGTCTCACTCTGTTGCCCAGGCTGG
AGGGCAGTGGCGCAATCTCAGCTCACTGCAACCTCCGCCTAGCAGGTTCAAGCAATTCTTGTGCCTCAGCCACCTGAGTA
GTTGGGATGACAGGCGTGCACCACCACGCCCAGCTAGCTAATCTTTGTATTTTTAGTAGAGACAGAGTTTTGCCATGTTG
GCCAGGCTGGTCTTGAATTCCCAGCCTCTAGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACTGGCATGAGC
CACTGCGCCTGGCCTATTTTCAGCCTTAAAAACAAAAACCCTGGAACATAGAAGTTCAGAACTTTCCTCTCTTCACAGAG
TTCCTCCTCGCATCATTTCATGTTGATCCTCTTATCCCCAGTGTCTTCTGCCTGAAGGCCTATTTTGTCTGAGTTTTCTA
TAGGTACATCTTTTGGTTAGTTTTTCTCTAGTACACCTTTTCCCATCGTTTTACTTTTTGGTGCCCTTAGGTTTTAAATT
TCCTCTTGTAAATAGCATAGAGCTGCATCTTATTTTTTCTTGGCCAATCTGGTCATCTGTGTTTTAAGAGGTGAATGTAA
ACCACATTTTCTACCTCTGGTTTTGTACTATATATTTACCATCCCTTTTACTTTGCTTCCTTTTTCTCCCTTTCTGCCTT
CCATTATAGTTTTAATACCCATCACTACCCTTTTCTCTGCATTGGCAGTTATAGTTCCGTTTGTATTCTTTTGGTGATCC
TCTTAAATATCTGAAATACACACCTGACTTTACAAAGCCAGACAATGCTCAGTCTCTTTAACCCCCTCTCAAATTGCCCT
CTCAGTCTTCCATGTTCTTGTGTCTCATGCATCTTGTTTCTGTGGCCCACAAATTAATCATTATTATTCATATTGCATAT
TAAATGCTTGTTTAGATTCACATGTTTACCAATTTGCTCACCATTTTTCCATCTAATTTCTTCCTTTTGGGTTCCATGTC
CTTGTTACTAAACTACATTCTTTAAAAATTATTTCGGCGGCCAGGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGG
GAGGCCGAGGCGAGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCCAACATGGTGAAACTCCATCTCTACTAAAA
ATACAATAATTAGCTGGGGGTGGTGGCAGGCGCCTGTAATCCCAGCTACTGAGGAGGCTGACTGAGGCAGGAGAATCGCT
TGAACCCGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCACCACTGCACCCCAGCCTGGCGACAGAACGAGACTTCGTCC
CCCTCCCCCCTCCCCCAAAAAAATGTTGATCTTCAGTCTGCGCATTCTGCTCTGGATTTTAAGCATCATTTCTGGCAGCT
CTTTTTCAGGAACTGTCTCTGCAGGTCTTTCAGTGTTCGCCTCTGGAGCTCTGCTCGGGCCCGCGAGTTCTCCTGGCGTT
GCCATCTGTGCCCTTTTCCTTATTCCCCATCACCTGTCTCTCTGGTGAGCTGCTTCCGATCAGCCTCCAGGTCCACGATT
TCTCTTCTGTTGTCCTTTTCTGCCTTCTCACCTCATCCTCTGAGACCTGAATTTCGATGGCTCTACTTTTCAATTATATT
ATTCTTTTTCAAACCTGGGCGTTCATTTCTAGCATCCTGTTCTATCCTGTGTCTGACTGTGCCTCCCGCACCTTCTCCCT
TCTCTCGCCCTAAGCCCCGTGAAGGCGCCGGGCCTTTGGCTCCGGCTGTTTCCCACGGCGCCCAGAACCGCGTCAGTCCT
GACACAGACTCGGTGAGGGCGGGAAGTGGTGCCGTGGGGCTGCAGCCTGGCCCGCCCGCTCCATCGGCCTAGGGCGGCCC
CACCGCCCTCCGGGCCTTACCTTGAGTTCGGGCTGCGGGAGAAGCTCCCGCGCTGCCCATGACGTCACGGGACTGTGACG
CGCCCAGAAGCCCCGCCCCTCGCGTCCCGGTCCGCGGACCCAGGCTCTCTGCGCCGTGACGTCACGGGTCCGGGCGGGCG
GGTTGTGCGTCGGCCCAATGGGAGCGGCGCACTGGCCTCCCCTTTAAGGAATGTTGTGACCTGACGTCACCGGGCGAGTT
ACCTCCCGCAGCCGCAGCCGCCGTGCTCAGCGCGAGCCCCGGAGCCCTTGAGCGCGAGGCGCGGAGCCCCCGGAGCCCCC
AAACCGCAGACACATCCCCGCGCCCCAGAGCCCCGGCCTGCGCGCCCAGCCGGGCCCGCGCGATGCCCTCAGACCGGCCT
TTCAAGCAGCGGCGGAGCTTCGGTGAGGCCCGGCAGGCGAGCTGCGAGCTCTGGGGCAGGGGTGCCGGCCGACCCCGACT
GCCGCAGGTGACGTCAGCCCCGTGACGTCAGGCTCTGGCTGGACCCTCGGGCTGGGACCAGCTCCGGCCTGGGCGGGGGC
TGCCCGCTTCCCCACCGCGATAGGTGCCAGGGGCTGTGGGGCCTGATGGCCCCGGGGGTGGGGGCTGGAGCTGGGGCGTG
GCCGGGGGCCGCCCCTCCGGGACAGGCGGGGCGGACCTGGGCCGGCCCGACCCGGCCTCACGGTCTGGCCGCTGTCCGCA
GCCGACCGCTGTAAGGAGGTACAGCAGATCCGCGACCAGCACCCCAGCAAAATCCCGGTGAGTCCCGCACCCCCAGCCCT
GCCCCGCCCCCGCCTCGCGCGTTCCCGACACGACCCCCTGCCCGCCCGCCCTGCTCCCAGGTGATCATCGAGCGCTACAA
GGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGA
TCATCCGGTGCGTGGGCAGCCGCCGCCAGGAGGTGGCTAGGGTCGGGAGGGGAGCCGGGTTCCCGCCGAGAAGGGGTGGG
AGTGGGGTCAGGGGTGATGGGACCGGGCGGTGGGCCCCTGTTCTGGGGTGGCTGGAAAGGTCAAGGTCGGGGCTGCAGTC
GGTGTTGGGTCAGAGGTGACAGCTGGGGTGAGAATGGGTGTGAAAGGCTGGGAATCATTCTGGGGGTCAGGGCTATGTCC
GTCCCGCAGCCAAGCCCCTCACAGCTGCATACTCTCCCGCCGGCTGCAGGCGCCGCCTGCAGCTGAACCCCACGCAGGCC
TTCTTCCTGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGA
GGACGGCTTCCTCTATATGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGA
GTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCA
GGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTT
GTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGTGTGGTTCATCTTTTT
TTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCCCTGAA
AGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGA
TTGCTCAGGCCTGCCTGG
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Primary source |
RefSeq : NM_032514.2 (GI:31563519)
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Name |
Microtubule-associated protein 1 light chain 3 alpha (MAP1LC3A), transcript variant 1
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Type of transcript |
mRNA
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Organism |
Homo sapiens
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Length |
1030 nt
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Map |
20cen-q13
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Location |
Chromosome 20 (NC_000020.10) strand : +
33146518...33146711 | 33147011...33147066 | 33147150...33147256 | 33147539...33148148 |
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Exon(s) |
Start |
End |
Length |
is coding |
Exon 3
|
1
|
194
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194
|
1
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Exon 4
|
195
|
250
|
56
|
1
|
Exon 5
|
251
|
357
|
107
|
1
|
Exon 6
|
358
|
967
|
610
|
1
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Primary source |
NCBI : CCDS13238
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Nucleotide |
MAP1LC3A, mRNA isoform 1[NM_032514.2] : 155...520
|
Length |
366
|
Location |
Chromosome 20 (NC_000020.10) strand : +
33146672...33146711 | 33147011...33147066 | 33147150...33147256 | 33147539...33147701 |
|
Start codon |
1
|
Translation |
NP_115903.1 |
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1 |
ACCGGGCGAG |
TTACCTCCCG |
CAGCCGCAGC |
CGCCGTGCTC |
AGCGCGAGCC |
CCGGAGCCCT |
TGAGCGCGAG |
GCGCGGAGCC |
|
81 |
CCCGGAGCCC |
CCAAACCGCA |
GACACATCCC |
CGCGCCCCAG |
AGCCCCGGCC |
TGCGCGCCCA |
GCCGGGCCCG |
CGCGATGCCC |
|
161 |
TCAGACCGGC |
CTTTCAAGCA |
GCGGCGGAGC |
TTCGCCGACC |
GCTGTAAGGA |
GGTACAGCAG |
ATCCGCGACC |
AGCACCCCAG |
|
241 |
CAAAATCCCG |
GTGATCATCG |
AGCGCTACAA |
GGGTGAGAAG |
CAGCTGCCCG |
TCCTGGACAA |
GACCAAGTTT |
TTGGTCCCGG |
|
321 |
ACCATGTCAA |
CATGAGCGAG |
TTGGTCAAGA |
TCATCCGGCG |
CCGCCTGCAG |
CTGAACCCCA |
CGCAGGCCTT |
CTTCCTGCTG |
|
401 |
GTGAACCAGC |
ACAGCATGGT |
GAGTGTGTCC |
ACGCCCATCG |
CGGACATCTA |
CGAGCAGGAG |
AAAGACGAGG |
ACGGCTTCCT |
|
481 |
CTATATGGTC |
TACGCCTCCC |
AGGAAACCTT |
CGGCTTCTGA |
GCCAGCAGTA |
GGGGGGCTCG |
GCCTGGGAGT |
CGGGGGGCCC |
|
561 |
CGGTCAGGCC |
CTGCCCAGAG |
AGCTCCTGGT |
TCCTGAACTG |
AGCTGCCTCT |
ACCGTGGTGG |
GCTGGGCAGG |
CATGTGCCCC |
|
641 |
CCTAGTCAGA |
GGGCACCAAC |
CCACCTACTC |
TGCCCCTGGG |
TGGATCCTGG |
GCCGGTCGTG |
TTAGGGTTGT |
CCCTCTGGGT |
|
721 |
GCTGGCTGGT |
GGGATGGGGG |
AGGGTGGGGA |
GCAGCTCCCA |
GCACCCCTGC |
TGTGTGGTTC |
ATCTTTTTTT |
TAGGCCCCTG |
|
801 |
CCTGTCTGCC |
CATCTGCCCC |
TCACCCACCC |
GAGGCTCTGC |
CCACCGCCTG |
GACCTGCCCA |
CCCCTGAAAG |
ACTGGCCCCT |
|
881 |
GGCTCCCCGC |
CCCTCGGTCT |
CCACGTGGTG |
TATGGATCTG |
TGGTCATTGT |
CCCTCTGCAG |
AATAAAGATT |
GCTCAGGCCT |
|
961 |
GCCTGGCAAA |
AAAAAAAAAA |
AAAAAAAAAA |
AAAAAAAAAA |
AAAAAAAAAA |
AAAAAAAAAA |
AAAAAAAAAA |
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>gi|31563519|ref|NM_032514.2|Microtubule-associated protein 1 light chain 3 alpha (MAP1LC3A), transcript variant 1
ACCGGGCGAGTTACCTCCCGCAGCCGCAGCCGCCGTGCTCAGCGCGAGCCCCGGAGCCCTTGAGCGCGAGGCGCGGAGCC
CCCGGAGCCCCCAAACCGCAGACACATCCCCGCGCCCCAGAGCCCCGGCCTGCGCGCCCAGCCGGGCCCGCGCGATGCCC
TCAGACCGGCCTTTCAAGCAGCGGCGGAGCTTCGCCGACCGCTGTAAGGAGGTACAGCAGATCCGCGACCAGCACCCCAG
CAAAATCCCGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGG
ACCATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTG
GTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCT
CTATATGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGGGGCCC
CGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCC
CCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGT
GCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGTGTGGTTCATCTTTTTTTTAGGCCCCTG
CCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCT
GGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCT
GCCTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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Primary source |
RefSeq : NM_181509.1 (GI:31563517)
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Name |
Microtubule-associated protein 1 light chain 3 alpha (MAP1LC3A), transcript variant 2
|
Type of transcript |
mRNA
|
Organism |
Homo sapiens
|
Length |
990 nt
|
Map |
20cen-q13
|
Location |
Chromosome 20 (NC_000020.10) strand : +
33134691...33134719 | 33137708...33137832 | 33147011...33147066 | 33147150...33147256 |
33147539...33148148 |
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Exon(s) |
Start |
End |
Length |
is coding |
Exon 1
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1
|
29
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29
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1
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Exon 2
|
30
|
154
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125
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1
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Exon 4
|
155
|
210
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56
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1
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Exon 5
|
211
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317
|
107
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1
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Exon 6
|
318
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927
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610
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1
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ID |
Class |
Location |
Mutation |
Length |
is synonymous |
Source |
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Primary source |
NCBI : CCDS13237
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Nucleotide |
MAP1LC3A, mRNA isoform 2[NM_181509.1] : 103...480
|
Length |
378
|
Location |
Chromosome 20 (NC_000020.10) strand : +
33137781...33137832 | 33147011...33147066 | 33147150...33147256 | 33147539...33147701 |
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Start codon |
1
|
Translation |
NP_852610.1 |
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1 |
GGTGCAAGGA |
GAAAGGATTT |
TGAGGAGGGG |
ACTCCATGGC |
TTCCGAGTTG |
CTGACTGACC |
CTCCACCTCA |
GAGGTAGTTC |
|
81 |
TGACACTGTC |
TCAGTTTTGC |
AGATGAAGAT |
GAGATTCTTC |
AGTTCTCCAT |
GTGGAAAAGC |
AGCTGTGGAC |
CCAGCCGACC |
|
161 |
GCTGTAAGGA |
GGTACAGCAG |
ATCCGCGACC |
AGCACCCCAG |
CAAAATCCCG |
GTGATCATCG |
AGCGCTACAA |
GGGTGAGAAG |
|
241 |
CAGCTGCCCG |
TCCTGGACAA |
GACCAAGTTT |
TTGGTCCCGG |
ACCATGTCAA |
CATGAGCGAG |
TTGGTCAAGA |
TCATCCGGCG |
|
321 |
CCGCCTGCAG |
CTGAACCCCA |
CGCAGGCCTT |
CTTCCTGCTG |
GTGAACCAGC |
ACAGCATGGT |
GAGTGTGTCC |
ACGCCCATCG |
|
401 |
CGGACATCTA |
CGAGCAGGAG |
AAAGACGAGG |
ACGGCTTCCT |
CTATATGGTC |
TACGCCTCCC |
AGGAAACCTT |
CGGCTTCTGA |
|
481 |
GCCAGCAGTA |
GGGGGGCTCG |
GCCTGGGAGT |
CGGGGGGCCC |
CGGTCAGGCC |
CTGCCCAGAG |
AGCTCCTGGT |
TCCTGAACTG |
|
561 |
AGCTGCCTCT |
ACCGTGGTGG |
GCTGGGCAGG |
CATGTGCCCC |
CCTAGTCAGA |
GGGCACCAAC |
CCACCTACTC |
TGCCCCTGGG |
|
641 |
TGGATCCTGG |
GCCGGTCGTG |
TTAGGGTTGT |
CCCTCTGGGT |
GCTGGCTGGT |
GGGATGGGGG |
AGGGTGGGGA |
GCAGCTCCCA |
|
721 |
GCACCCCTGC |
TGTGTGGTTC |
ATCTTTTTTT |
TAGGCCCCTG |
CCTGTCTGCC |
CATCTGCCCC |
TCACCCACCC |
GAGGCTCTGC |
|
801 |
CCACCGCCTG |
GACCTGCCCA |
CCCCTGAAAG |
ACTGGCCCCT |
GGCTCCCCGC |
CCCTCGGTCT |
CCACGTGGTG |
TATGGATCTG |
|
881 |
TGGTCATTGT |
CCCTCTGCAG |
AATAAAGATT |
GCTCAGGCCT |
GCCTGGCAAA |
AAAAAAAAAA |
AAAAAAAAAA |
AAAAAAAAAA |
|
961 |
AAAAAAAAAA |
AAAAAAAAAA |
AAAAAAAAAA |
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>gi|31563517|ref|NM_181509.1|Microtubule-associated protein 1 light chain 3 alpha (MAP1LC3A), transcript variant 2
GGTGCAAGGAGAAAGGATTTTGAGGAGGGGACTCCATGGCTTCCGAGTTGCTGACTGACCCTCCACCTCAGAGGTAGTTC
TGACACTGTCTCAGTTTTGCAGATGAAGATGAGATTCTTCAGTTCTCCATGTGGAAAAGCAGCTGTGGACCCAGCCGACC
GCTGTAAGGAGGTACAGCAGATCCGCGACCAGCACCCCAGCAAAATCCCGGTGATCATCGAGCGCTACAAGGGTGAGAAG
CAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCG
CCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCG
CGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGA
GCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGGGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTGAACTG
AGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGG
TGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCA
GCACCCCTGCTGTGTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGC
CCACCGCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTG
TGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCCTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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Exon number |
2
|
Length |
125 nt
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Location |
Chromosome 20 (NC_000020.10) : 33137708...33137832 (+)
|
Is part of |
MAP1LC3A, mRNA isoform 2
(NM_181509.1)
|
Sequence |
Show
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GACTCCATGGCTTCCGAGTTGCTGACTGACCCTCCACCTCAGAGGTAGTTCTGACACTGTCTCAGTTTTGCAGATGAAGA
TGAGATTCTTCAGTTCTCCATGTGGAAAAGCAGCTGTGGACCCAG
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Exon number |
3
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Length |
194 nt
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Location |
Chromosome 20 (NC_000020.10) : 33146518...33146711 (+)
|
Is part of |
MAP1LC3A, mRNA isoform 1
(NM_032514.2)
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Sequence |
Show
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ACCGGGCGAGTTACCTCCCGCAGCCGCAGCCGCCGTGCTCAGCGCGAGCCCCGGAGCCCTTGAGCGCGAGGCGCGGAGCC
CCCGGAGCCCCCAAACCGCAGACACATCCCCGCGCCCCAGAGCCCCGGCCTGCGCGCCCAGCCGGGCCCGCGCGATGCCC
TCAGACCGGCCTTTCAAGCAGCGGCGGAGCTTCG
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Exon number |
6
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Length |
610 nt
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Location |
Chromosome 20 (NC_000020.10) : 33147539...33148148 (+)
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Is part of |
MAP1LC3A, mRNA isoform 1
(NM_032514.2)
MAP1LC3A, mRNA isoform 2
(NM_181509.1)
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Sequence |
Show
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GCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCA
TCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGGAAACCTTCGGCTTC
TGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGGGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTGAA
CTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCT
GGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTC
CCAGCACCCCTGCTGTGTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTC
TGCCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGAT
CTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCCTGGC
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Primary source |
Uniprot : Q9H492
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Name |
Microtubule-associated proteins 1A/1B light chain 3A
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Alternative name(s) |
Autophagy-related protein LC3 A Autophagy-related ubiquitin-like modifier LC3 A MAP1 light chain 3-like protein 1 MAP1A/MAP1B light chain 3 A Microtubule-associated protein 1 light chain 3 alpha
|
Synonym(s) |
MAP1A/MAP1B LC3 A
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Organism |
Homo sapiens
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Length |
121 aa
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Protein existence |
---
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General annotation (Comments)
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top
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Function
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Probably involved in formation of autophagosomal vacuoles (autophagosomes).
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Ptm
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The precursor molecule is cleaved by APG4B/ATG4B to form the cytosolic form, LC3-I. This is activated by APG7L/ATG7, transferred to ATG3 and conjugated to phospholipid to form the membrane-bound form, LC3-II.
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Similarity
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Belongs to the MAP1 LC3 family.
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Subcellular location
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Cytoplasm. Endomembrane system; Lipid- anchor. Cytoplasmic vesicle, autophagosome membrane; Lipid-anchor. Note=LC3-II binds to the autophagic membranes.
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Subunit
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3 different light chains, LC1, LC2 and LC3, can associate with MAP1A and MAP1B proteins (By similarity).
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Tissue specificity
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Most abundant in heart, brain, liver, skeletal muscle and testis but absent in thymus and peripheral blood leukocytes.
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Biological process
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autophagic vacuole assembly [GO:0000045]
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Cellular component
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autophagic vacuole membrane [GO:0000421]
cytosol [GO:0005829]
microtubule [GO:0005874]
endomembrane system [GO:0012505]
cytoplasmic vesicle [GO:0031410]
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Molecular function
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protein binding [GO:0005515]
phosphatidylethanolamine binding [GO:0008429]
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Alternative product(s)
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top
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Uniprot Identifier
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Difference(s) with the 'canonical' sequence
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Notes
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Sequences
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Isoform 1
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Q9H492-1
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---
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'Canonical' sequence
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Get Fasta
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Isoform 2
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Q9H492-2
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1-13 : MPSDRPFKQRRSF -> MKMRFFSSPCGKAAVDP
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---
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Get Fasta
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Feature key |
Position
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Length
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Description
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Feature identifier
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Molecule processing |
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Propeptide
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121 - 121
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1
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Removed in mature form
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PRO_0000017193
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Natural variations |
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Alternative sequence
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1 - 13
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13
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MPSDRPFKQRRSF -> MKMRFFSSPCGKAAVDP
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VSP_013660
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Amino acid modifications |
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Lipidation
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120 - 120
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1
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Phosphatidylethanolamine amidated glycine (Probable)
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Q9H492-LIPID-120
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Experimental info |
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Mutagenesis
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120 - 120
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1
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G->A: No processing of precursor
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Q9H492-MUTAGEN-120
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1 |
MPSDRPFKQR |
RSFADRCKEV |
QQIRDQHPSK |
IPVIIERYKG |
EKQLPVLDKT |
KFLVPDHVNM |
SELVKIIRRR |
LQLNPTQAFF |
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81 |
LLVNQHSMVS |
VSTPIADIYE |
QEKDEDGFLY |
MVYASQETFG |
F |
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>sp|Q9H492|MLP3A_human Microtubule-associated proteins 1A/1B light chain 3A
MPSDRPFKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFF
LLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF
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